RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CCDC59Q9P031 241 aaKnown RBP15.39■□□□□ 0.05
RFFL-211ENST00000584541 GLS2Q9UI32 602 aa15.39■□□□□ 0.05
RFFL-211ENST00000584541 OOEPA6NGQ2 149 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 LGALS8O00214 317 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 NDUFS8O00217 210 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 WNT9BO14905 357 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 MUC1P15941 1255 aaPredicted RBP15.38■□□□□ 0.05
RFFL-211ENST00000584541 GPR6P46095 362 aaPredicted RBP15.38■□□□□ 0.05
RFFL-211ENST00000584541 SCAND1P57086 179 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 FGF12P61328 243 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 BTG1P62324 171 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 SFRP4Q6FHJ7 346 aaPredicted RBP15.38■□□□□ 0.05
RFFL-211ENST00000584541 ACOT12Q8WYK0 555 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 PIMREGQ9BSJ6 248 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 DCUN1D5Q9BTE7 237 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 BARHL1Q9BZE3 327 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 WDR13Q9H1Z4 485 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 HES4Q9HCC6 221 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 HMG20AQ9NP66 347 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 NLKQ9UBE8 527 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 FBN2P35556 2912 aa15.38■□□□□ 0.05
RFFL-211ENST00000584541 ISPDA4D126 451 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 C3orf80F5H4A9 247 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 F8VVB4 439 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 F8VWA3 439 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 FSTL3O95633 263 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 MPIG6BO95866 241 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 KNG1P01042 644 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 VSIG8P0DPA2 414 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 SNRPBP14678 240 aaKnown RBP15.37■□□□□ 0.05
RFFL-211ENST00000584541 MGMTP16455 207 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 GIFP27352 417 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 DYNC1I2Q13409 638 aaKnown RBP15.37■□□□□ 0.05
RFFL-211ENST00000584541 FAM189A2Q15884 450 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 SPIN3Q5JUX0 258 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 FAM201AQ5SY85 155 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 TEX36Q5VZQ5 186 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 MZT2AQ6P582 158 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 MUC20Q8N307 709 aaPredicted RBP15.37■□□□□ 0.05
RFFL-211ENST00000584541 DEFB108BQ8NET1 73 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 Q8NFD4 153 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 FAM46BQ96A09 425 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 C1orf147Q96MC9 270 aaPredicted RBP15.37■□□□□ 0.05
RFFL-211ENST00000584541 TMEM59Q9BXS4 323 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 FBLN5Q9UBX5 448 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 WIPI2Q9Y4P8 454 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 ETV7Q9Y603 341 aa15.37■□□□□ 0.05
RFFL-211ENST00000584541 IGHV3OR15-7A0A075B7D8 119 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 A0A0B4J203 849 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 TMEM14DPA8MWL7 114 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 ZNF205O95201 554 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 RBMXP38159 391 aaKnown RBP15.36■□□□□ 0.05
RFFL-211ENST00000584541 MDH2P40926 338 aaKnown RBP15.36■□□□□ 0.05
RFFL-211ENST00000584541 SNU13P55769 128 aaKnown RBP15.36■□□□□ 0.05
RFFL-211ENST00000584541 CLEC12BQ2HXU8 276 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 C19orf18Q8NEA5 215 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 LGALS14Q8TCE9 139 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 URM1Q9BTM9 101 aaKnown RBP15.36■□□□□ 0.05
RFFL-211ENST00000584541 SELENOIQ9C0D9 397 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 KCNK15Q9H427 330 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 BANF2Q9H503 90 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 OR5V1Q9UGF6 321 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 RAB22AQ9UL26 194 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 SPATA2Q9UM82 520 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 ST3GAL6Q9Y274 331 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 ARID1AO14497 2285 aa15.36■□□□□ 0.05
RFFL-211ENST00000584541 ANKRD17O75179 2603 aaKnown RBP15.35■□□□□ 0.05
RFFL-211ENST00000584541 TMEM272A0A1B0GTI8 110 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 A0A1W2PP11 408 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 OR2AT4A6NND4 320 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.35■□□□□ 0.05
RFFL-211ENST00000584541 NDUFA2O43678 99 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 PAHP00439 452 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 IGHV2-70P01814 119 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 RAB6AP20340 208 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 RBM11P57052 281 aaKnown RBP15.35■□□□□ 0.05
RFFL-211ENST00000584541 QRFPP83859 136 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 HOXA4Q00056 320 aaPredicted RBP15.35■□□□□ 0.05
RFFL-211ENST00000584541 ZMYND11Q15326 602 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 AVPI1Q5T686 147 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 OR10K2Q6IF99 312 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 LINC00596Q86U02 117 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 TMEM104Q8NE00 496 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 OR51T1Q8NGJ9 327 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 C10orf105Q8TEF2 133 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 PTX4Q96A99 478 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 OR14J1Q9UGF5 321 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 SPG11Q96JI7 2443 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 CENPEQ02224 2701 aa15.35■□□□□ 0.05
RFFL-211ENST00000584541 NKX6-3A6NJ46 265 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 SH2D1BO14796 132 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 LDLRAD4O15165 306 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 PSG2P11465 335 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 CPT2P23786 658 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 GABRA2P47869 451 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 UNC119Q13432 240 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 IL13RA2Q14627 380 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 ZNF146Q15072 292 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 PIGYQ3MUY2 71 aa15.34■□□□□ 0.05
RFFL-211ENST00000584541 ZNF404Q494X3 552 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms