RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 PRB3Q04118 309 aaPredicted RBP12.91□□□□□ -0.34
SKA2-209ENST00000583976 SCCPDHQ8NBX0 429 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 GPR148Q8TDV2 347 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 LHX4Q969G2 390 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 C10orf35Q96D05 121 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 WDFY2Q96P53 400 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 YTHDF1Q9BYJ9 559 aaKnown RBP12.91□□□□□ -0.34
SKA2-209ENST00000583976 SIRPDQ9H106 197 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 BEX1Q9HBH7 125 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 SLC7A11Q9UPY5 501 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 LRRC42Q9Y546 428 aa12.91□□□□□ -0.34
SKA2-209ENST00000583976 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 TMEM210A6NLX4 147 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 TNFRSF13BO14836 293 aaPredicted RBP12.9□□□□□ -0.34
SKA2-209ENST00000583976 NDUFA7O95182 113 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 CRYBA1P05813 215 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 RPSAP08865 295 aaKnown RBP12.9□□□□□ -0.34
SKA2-209ENST00000583976 GABARAPL2P60520 117 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 GMFBP60983 142 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 GNG3P63215 75 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 FAM90A1Q86YD7 464 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 PP6455Q8WZ26 134 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 PGLYRP3Q96LB9 341 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 CHST5Q9GZS9 411 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 NOX4Q9NPH5 578 aa12.9□□□□□ -0.34
SKA2-209ENST00000583976 IGHV1-69DA0A0B4J2H0 117 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 CLPSL1A2RUU4 121 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 OR5B21A6NL26 309 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 GPR137BO60478 399 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 GATBO75879 557 aaKnown RBP12.89□□□□□ -0.35
SKA2-209ENST00000583976 TSPAN15O95858 294 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 IGHV1-69P01742 117 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 OCM2P0CE71 109 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 OCMP0CE72 109 aaPredicted RBP12.89□□□□□ -0.35
SKA2-209ENST00000583976 NPY4RP50391 375 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 DLX1P56177 255 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 ACSM1Q08AH1 577 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 FAM76BQ5HYJ3 339 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 METTL11BQ5VVY1 283 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 HAGHLQ6PII5 290 aaPredicted RBP12.89□□□□□ -0.35
SKA2-209ENST00000583976 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 SERPINA12Q8IW75 414 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 TMEM86BQ8N661 226 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 GCSAMQ8N6F7 178 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 OR13C9Q8NGT0 318 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 LRRC29Q8WV35 223 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 ORAI1Q96D31 301 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 OR51I2Q9H344 312 aa12.89□□□□□ -0.35
SKA2-209ENST00000583976 IGKV1-9A0A0C4DH69 117 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 A0A1W2PPK0 400 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 PQLC2LA1A4F0 135 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 AKR7A2O43488 359 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 RHBDL1O75783 438 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 ATF1P18846 271 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 HAAOP46952 286 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 FUT6P51993 359 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 ARF6P62330 175 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 BDH1Q02338 343 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 EMX1Q04741 257 aaPredicted RBP12.88□□□□□ -0.35
SKA2-209ENST00000583976 CNN3Q15417 329 aaKnown RBP12.88□□□□□ -0.35
SKA2-209ENST00000583976 ANGPTL5Q86XS5 388 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 SPARTQ8N0X7 666 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 PIP4P2Q8N4L2 257 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 OR5D14Q8NGL3 314 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 SSMEM1Q8WWF3 244 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 ST8SIA4Q92187 359 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 TMEM106AQ96A25 262 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 SEH1LQ96EE3 360 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 BORCS8Q96FH0 119 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 TMED9Q9BVK6 235 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 TLNRD1Q9H1K6 362 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 POMT1Q9Y6A1 747 aa12.88□□□□□ -0.35
SKA2-209ENST00000583976 IGKV1-27A0A075B6S5 117 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 A0A1B0GUS0 222 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 DVL1O14640 695 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 INMTO95050 263 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 CD2P06729 351 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 AZGP1P25311 298 aaKnown RBP12.87□□□□□ -0.35
SKA2-209ENST00000583976 RPS11P62280 158 aaKnown RBP eCLIP12.87□□□□□ -0.35
SKA2-209ENST00000583976 TBCEQ15813 527 aaPredicted RBP12.87□□□□□ -0.35
SKA2-209ENST00000583976 YIF1BQ5BJH7 314 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 LIPKQ5VXJ0 399 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 CD276Q5ZPR3 534 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 ASPHD2Q6ICH7 369 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 UTS2BQ765I0 119 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 BTN2A1Q7KYR7 527 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 ZNF573Q86YE8 665 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 C1QL4Q86Z23 238 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 BATF2Q8N1L9 274 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 SVOPQ8N4V2 548 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 PARP16Q8N5Y8 322 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 FAM216BQ8N7L0 139 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 LINC01006Q8NI28 216 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 AQP3Q92482 292 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 UFD1Q92890 307 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 SPACA5Q96QH8 159 aa12.87□□□□□ -0.35
SKA2-209ENST00000583976 OR14A2Q96R54 314 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms