RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 TIMM50Q3ZCQ8 353 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 ELP2Q6IA86 826 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 CLEC9AQ6UXN8 241 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 ZNF788Q6ZQV5 615 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 LYPD6Q86Y78 171 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 BATF2Q8N1L9 274 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 SSBP3Q9BWW4 388 aaPredicted RBP16.71■□□□□ 0.27
TOP3A-213ENST00000582230 CNTD2Q9H8S5 307 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 SEBOXQ9HB31 216 aaPredicted RBP16.71■□□□□ 0.27
TOP3A-213ENST00000582230 HMG20AQ9NP66 347 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 PCDHB16Q9NRJ7 776 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 RBFOX1Q9NWB1 397 aaKnown RBP16.71■□□□□ 0.27
TOP3A-213ENST00000582230 CLN8Q9UBY8 286 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 GSTK1Q9Y2Q3 226 aa16.71■□□□□ 0.27
TOP3A-213ENST00000582230 MAP1AP78559 2803 aaPredicted RBP16.71■□□□□ 0.27
TOP3A-213ENST00000582230 A8MXK9 166 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 ZNF780AO75290 641 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-213ENST00000582230 LY6G6DO95868 133 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 TGFAP01135 160 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 SFTPBP07988 381 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 CD37P11049 281 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 PRDX2P32119 198 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 GABRA2P47869 451 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 MTNR1BP49286 362 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 PSMD7P51665 324 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 GNB2P62879 340 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 IL13RA1P78552 427 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 KRTAP1-1Q07627 177 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 GPR176Q14439 515 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 SPIN3Q5JUX0 258 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 C22orf42Q6IC83 251 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 ZNF841Q6ZN19 808 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 C1QL2Q7Z5L3 287 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 SDSLQ96GA7 329 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 SMR3AQ99954 134 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 METTL9Q9H1A3 318 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 ELL3Q9HB65 397 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-213ENST00000582230 EXOSC4Q9NPD3 245 aaKnown RBP16.7■□□□□ 0.26
TOP3A-213ENST00000582230 TXNL4BQ9NX01 149 aaKnown RBP16.7■□□□□ 0.26
TOP3A-213ENST00000582230 IL36GQ9NZH8 169 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 CTSZQ9UBR2 303 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 GLS2Q9UI32 602 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 ZNF222Q9UK12 451 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 ING4Q9UNL4 249 aa16.7■□□□□ 0.26
TOP3A-213ENST00000582230 POLR3KQ9Y2Y1 108 aaPredicted RBP16.7■□□□□ 0.26
TOP3A-213ENST00000582230 PDCD5O14737 125 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 SIGLEC5O15389 551 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 NDUFB3O43676 98 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 PRKACAP17612 351 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 AMY2BP19961 511 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 MYL9P24844 172 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 SEC61A1P61619 476 aaKnown RBP16.69■□□□□ 0.26
TOP3A-213ENST00000582230 ZNF146Q15072 292 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 C11orf91Q3C1V1 193 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 FAM166AQ6J272 317 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 GDPGP1Q6ZNW5 385 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 ZNF561Q8N587 486 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 Q8NFD4 153 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 GAFA1Q96PS6 74 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 NKX3-1Q99801 234 aaPredicted RBP16.69■□□□□ 0.26
TOP3A-213ENST00000582230 OR51E2Q9H255 320 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 GHRLQ9UBU3 117 aa16.69■□□□□ 0.26
TOP3A-213ENST00000582230 MRPS28Q9Y2Q9 187 aaKnown RBP16.69■□□□□ 0.26
TOP3A-213ENST00000582230 TRAV20A0A0B4J274 112 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 DVL1O14640 695 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 GPR37O15354 613 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 CDRT1O95170 752 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 CSTBP04080 98 aaKnown RBP16.68■□□□□ 0.26
TOP3A-213ENST00000582230 GADD45AP24522 165 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 RANBP1P43487 201 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 DVL1P1P54792 670 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-213ENST00000582230 FGF12P61328 243 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 LRRC10Q5BKY1 277 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 C1orf100Q5SVJ3 147 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 WDR25Q64LD2 544 aaPredicted RBP16.68■□□□□ 0.26
TOP3A-213ENST00000582230 AWAT2Q6E213 333 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 GLCCI1Q86VQ1 547 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 CD177Q8N6Q3 437 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 TBC1D15Q8TC07 691 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 YIPF6Q96EC8 236 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 CHCHD6Q9BRQ6 235 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 LPAR2Q9HBW0 351 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 OR14J1Q9UGF5 321 aa16.68■□□□□ 0.26
TOP3A-213ENST00000582230 CR1P17927 2039 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 PPIAL4CA0A0B4J2A2 164 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 KIAA1324LA8MWY0 1029 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-213ENST00000582230 SH2D1BO14796 132 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 PHF1O43189 567 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-213ENST00000582230 CHRM2P08172 466 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 ZNF16P17020 682 aaPredicted RBP16.67■□□□□ 0.26
TOP3A-213ENST00000582230 ZFP36P26651 326 aaKnown RBP16.67■□□□□ 0.26
TOP3A-213ENST00000582230 LCN2P80188 198 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 CD276Q5ZPR3 534 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 GLIPR1L1Q6UWM5 242 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 FAM216BQ8N7L0 139 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 OR4D6Q8NGJ1 314 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 TMEM186Q96B77 213 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 OR5V1Q9UGF6 321 aa16.67■□□□□ 0.26
TOP3A-213ENST00000582230 AK6Q9Y3D8 172 aaKnown RBP16.67■□□□□ 0.26
TOP3A-213ENST00000582230 MAB21L2Q9Y586 359 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms