RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CLDN8P56748 225 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 LCN2P80188 198 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 BEX5Q5H9J7 111 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 CLEC18BQ6UXF7 455 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 CYHR1Q6ZMK1 362 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 VTCN1Q7Z7D3 282 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 OR4K13Q8NH42 304 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 RNASE11Q8TAA1 199 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 AGR3Q8TD06 166 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 TCP10LQ8TDR4 215 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 TMEM234Q8WY98 164 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 OR8D1Q8WZ84 308 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 TFGQ92734 400 aaPredicted RBP0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 APOBEC3DQ96AK3 386 aaPredicted RBP0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 C9orf72Q96LT7 481 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 OR2A7Q96R45 310 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 OR8B2Q96RD0 313 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 CHID1Q9BWS9 393 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 VPS37BQ9H9H4 285 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 MRPL22Q9NWU5 206 aaKnown RBP0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 DDIT4Q9NX09 232 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 ADA2Q9NZK5 511 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 TAC3Q9UHF0 121 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 KLF13Q9Y2Y9 288 aaPredicted RBP0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 KLF12Q9Y4X4 402 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF780BQ9Y6R6 833 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 U3KQK5 164 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 C2orf16Q68DN1 1984 aa0.88□□□□□ -2.27
SMCHD1-206ENST00000581631 KMT2EQ8IZD2 1858 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 H3BMM0 161 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 K7EPK0 472 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 HMMRO75330 724 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 KLK1P06870 262 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF22P17026 224 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 PMCHP20382 165 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 CRABP2P29373 138 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 FOXF1Q12946 379 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 DNAJC3Q13217 504 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 IL18Q14116 193 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 TMEM241Q24JQ0 296 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 PIP5KL1Q5T9C9 394 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 THOC7Q6I9Y2 204 aaKnown RBP0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 ASCL4Q6XD76 172 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 Q6ZSA8 131 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 MRPL21Q7Z2W9 205 aaKnown RBP0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 MICU2Q8IYU8 434 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 COMMD1Q8N668 190 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 DNAAF3Q8N9W5 541 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 OR10Z1Q8NGY1 313 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 LMX1AQ8TE12 382 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 GPX8Q8TED1 209 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 GLYATL2Q8WU03 294 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 PEX13Q92968 403 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 NAT6Q93015 286 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 UBE2WQ96B02 151 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 SPACA5Q96QH8 159 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 SRRQ9GZT4 340 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 LRRC19Q9H756 370 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 ZC4H2Q9NQZ6 224 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 ORC6Q9Y5N6 252 aa0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF706Q9Y5V0 76 aaPredicted RBP0.87□□□□□ -2.27
SMCHD1-206ENST00000581631 DOCK6Q96HP0 2047 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 PLEKHG2Q9H7P9 1386 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 PLXNB3Q9ULL4 1909 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 IGHV3-43A0A0B4J1X8 118 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 NCF1BA6NI72 391 aaPredicted RBP0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 NCF1CA8MVU1 366 aaPredicted RBP0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 F5H5P2 479 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 DFFAO00273 331 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 GCGP01275 180 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 TPM2P07951 284 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 RHOCP08134 193 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CGB3P0DN86 165 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CGB7P0DN87 165 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 MLNP12872 115 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CD9P21926 228 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 HCCSP53701 268 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CLDN6P56747 220 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CLDN18P56856 261 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 TAS2R39P59534 338 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CST6Q15828 149 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 RAB11BQ15907 218 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 MLIPQ5VWP3 458 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 PLCXD3Q63HM9 321 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 TCF23Q7RTU1 214 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 HS3ST5Q8IZT8 346 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 PROKR2Q8NFJ6 384 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 OR4K2Q8NGD2 314 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 OR8A1Q8NGG7 326 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 C2orf15Q8WU43 125 aaKnown RBP0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 PIH1D2Q8WWB5 315 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 CERS2Q96G23 380 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 RHOFQ9HBH0 211 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 RBM22Q9NW64 420 aaKnown RBP eCLIP0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 PRO0628Q9UI54 55 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 NAGKQ9UJ70 344 aa0.86□□□□□ -2.27
SMCHD1-206ENST00000581631 IGKV1D-37A0A075B6S9 117 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 IGHV2OR16-5A0A0B4J2B6 119 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 A0A1B0GTQ1 180 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 A6NED7 52 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms