RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 TNFRSF14Q92956 283 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 ITFG2Q969R8 447 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 SLAMF9Q96A28 289 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 SLC25A28Q96A46 364 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 C4orf36Q96KX1 117 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 NRIP2Q9BQI9 281 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 HES4Q9HCC6 221 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 C19orf12Q9NSK7 152 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 SLC7A11Q9UPY5 501 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 PCDHGB1Q9Y5G3 927 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 KPTNQ9Y664 436 aa7.95□□□□□ -1.14
TOP3A-211ENST00000581536 A0A1W2PQ09 198 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 OR4C45A6NMZ5 311 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 DHRS7CA6NNS2 312 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 NXPH2O95156 264 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 IGHV4-59P01825 116 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 ISG15P05161 165 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 HTR1AP08908 422 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 MPZP25189 248 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 DUSP1P28562 367 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 NPBWR2P48146 333 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 GTF2A1P52655 376 aaPredicted RBP7.94□□□□□ -1.14
TOP3A-211ENST00000581536 CAPZA1P52907 286 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 CAV3P56539 151 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 BPIFB3P59826 476 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 ALKBH1Q13686 389 aaKnown RBP7.94□□□□□ -1.14
TOP3A-211ENST00000581536 GALEQ14376 348 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 TMEM244Q5VVB8 128 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 TMEM200BQ69YZ2 307 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 HCP5Q6MZN7 132 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 CRIP3Q6Q6R5 217 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 FIP1L1Q6UN15 594 aaKnown RBP7.94□□□□□ -1.14
TOP3A-211ENST00000581536 FAM220AQ7Z4H9 259 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 KCTD20Q7Z5Y7 419 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 FAM185AQ8N0U4 392 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 C11orf42Q8N5U0 333 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 C17orf50Q8WW18 174 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 RFT1Q96AA3 541 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 SPACA5Q96QH8 159 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 ALG8Q9BVK2 526 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 CHIAQ9BZP6 476 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 PLEKHA1Q9HB21 404 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 ERVK13-1Q9NX77 482 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 IL36RNQ9UBH0 155 aa7.94□□□□□ -1.14
TOP3A-211ENST00000581536 CLDN34H7C241 214 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 SPRY1O43609 319 aaPredicted RBP7.93□□□□□ -1.14
TOP3A-211ENST00000581536 SERPINA3P01011 423 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 TK1P04183 234 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 UBCP0CG48 685 aaKnown RBP7.93□□□□□ -1.14
TOP3A-211ENST00000581536 CCL3L1P16619 93 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 ATF1P18846 271 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 BCL3P20749 454 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 MDKP21741 143 aaPredicted RBP7.93□□□□□ -1.14
TOP3A-211ENST00000581536 CCR9P51686 369 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 COL10A1Q03692 680 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 SRSF4Q08170 494 aaKnown RBP7.93□□□□□ -1.14
TOP3A-211ENST00000581536 IL24Q13007 206 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 SLC25A26Q70HW3 274 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 EGFL6Q8IUX8 553 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 MKXQ8IYA7 352 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 CNIH3Q8TBE1 160 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 MISP3Q96FF7 219 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 BORCS8Q96FH0 119 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 AJUBAQ96IF1 538 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 Q96MT0 163 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 PDCD1LG2Q9BQ51 273 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 PKIBQ9C010 78 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 CHST5Q9GZS9 411 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 NOX4Q9NPH5 578 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 MRPS18AQ9NVS2 196 aaKnown RBP7.93□□□□□ -1.14
TOP3A-211ENST00000581536 NBEAL1Q6ZS30 2694 aa7.93□□□□□ -1.14
TOP3A-211ENST00000581536 IGKV1-12A0A0C4DH73 117 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 TMEM82A0PJX8 343 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 SNTNA6NMZ2 147 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 H0YAE9 185 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 NPFFO15130 113 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ANGPTL7O43827 346 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 MPZL2O60487 215 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 HTR3BO95264 441 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 IGKV1D-12P01611 117 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 LIMS3P0CW19 117 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 LIMS4P0CW20 117 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 PIPP12273 146 aaPredicted RBP7.92□□□□□ -1.14
TOP3A-211ENST00000581536 AZGP1P25311 298 aaKnown RBP7.92□□□□□ -1.14
TOP3A-211ENST00000581536 IER3P46695 156 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 RBP2P50120 134 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ETV1P50549 477 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ATP1B3P54709 279 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 SNU13P55769 128 aaKnown RBP7.92□□□□□ -1.14
TOP3A-211ENST00000581536 MTCP1P56278 107 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 RPL31P62899 125 aaKnown RBP7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ACTC1P68032 377 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ACTA1P68133 377 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 FOXL1Q12952 345 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ZNF273Q14593 569 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 SMIM21Q3B7S5 101 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 ZNF691Q5VV52 312 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 XAF1Q6GPH4 301 aa7.92□□□□□ -1.14
TOP3A-211ENST00000581536 METAP1DQ6UB28 335 aaPredicted RBP7.92□□□□□ -1.14
TOP3A-211ENST00000581536 C1orf122Q6ZSJ8 110 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms