RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 SMIM19Q96E16 107 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 C19orf24Q9BVV8 132 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 ZCCHC4Q9H5U6 513 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 CNTD2Q9H8S5 307 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 RBFOX1Q9NWB1 397 aaKnown RBP16.57■□□□□ 0.24
SS18-218ENST00000581021 OR14J1Q9UGF5 321 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 DHDHQ9UQ10 334 aa16.57■□□□□ 0.24
SS18-218ENST00000581021 MDFIC2A0A1B0GVS7 189 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 ANGPTL7O43827 346 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 TOX4O94842 621 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 KNG1P01042 644 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 CALCBP10092 127 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 NDUFB7P17568 137 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 BCL3P20749 454 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 ATP1B3P54709 279 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 C6orf141Q5SZD1 244 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 DMKNQ6E0U4 476 aaPredicted RBP16.56■□□□□ 0.24
SS18-218ENST00000581021 LHFPL2Q6ZUX7 228 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 C9orf139Q6ZV77 190 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 ZDHHC22Q8N966 263 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 OR5D18Q8NGL1 313 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 ZNF418Q8TF45 676 aaPredicted RBP16.56■□□□□ 0.24
SS18-218ENST00000581021 PGLYRP3Q96LB9 341 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 C1orf147Q96MC9 270 aaPredicted RBP16.56■□□□□ 0.24
SS18-218ENST00000581021 C19orf12Q9NSK7 152 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 ONECUT1Q9UBC0 465 aa16.56■□□□□ 0.24
SS18-218ENST00000581021 CENPVL3A0A0U1RRI6 287 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 SLC1A7O00341 560 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 GPR37O15354 613 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 RPS11P62280 158 aaKnown RBP eCLIP16.55■□□□□ 0.24
SS18-218ENST00000581021 PDZK1IP1Q13113 114 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 METTL11BQ5VVY1 283 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 IZUMO2Q6UXV1 221 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.55■□□□□ 0.24
SS18-218ENST00000581021 ORAI1Q96D31 301 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 NKX3-1Q99801 234 aaPredicted RBP16.55■□□□□ 0.24
SS18-218ENST00000581021 SUCNR1Q9BXA5 334 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 TAS2R4Q9NYW5 299 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 PCDHGB5Q9Y5G0 923 aa16.55■□□□□ 0.24
SS18-218ENST00000581021 A0A0A6YYJ9 748 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 SULT1B1O43704 296 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 ZNF737O75373 536 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 ATP6V1G2O95670 118 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 MYF6P23409 242 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 FPR2P25090 351 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 ZP1P60852 638 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 VMO1Q7Z5L0 202 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 SERPINA12Q8IW75 414 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 STX19Q8N4C7 294 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 ZNF561Q8N587 486 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 GPR148Q8TDV2 347 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 GHSRQ92847 366 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 ANKRD60Q9BZ19 345 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 ZNF281Q9Y2X9 895 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 KPTNQ9Y664 436 aa16.54■□□□□ 0.24
SS18-218ENST00000581021 TRBV5-5A0A0J9YX44 114 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 TMEM82A0PJX8 343 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 H0YHG0 523 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 ALX3O95076 343 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 CDK1P06493 297 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 CAPZA1P52907 286 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 COL10A1Q03692 680 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 PDZD9Q8IXQ8 264 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 KIR3DL3Q8N743 410 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 OR5D14Q8NGL3 314 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 EMG1Q92979 244 aaKnown RBP16.53■□□□□ 0.24
SS18-218ENST00000581021 LHX4Q969G2 390 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 MS4A7Q9GZW8 240 aaPredicted RBP16.53■□□□□ 0.24
SS18-218ENST00000581021 SIRT7Q9NRC8 400 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 CHCHD3Q9NX63 227 aaKnown RBP16.53■□□□□ 0.24
SS18-218ENST00000581021 ANK2Q01484 3957 aa16.53■□□□□ 0.24
SS18-218ENST00000581021 PNMA8CA0A1B0GUJ8 204 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 TK1P04183 234 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 RPSAP08865 295 aaKnown RBP16.52■□□□□ 0.24
SS18-218ENST00000581021 DUSP1P28562 367 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 RIPK1Q13546 671 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 KISS1Q15726 138 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 GPR157Q5UAW9 335 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 NANOGP1Q8N7R0 232 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 TNFRSF14Q92956 283 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 TMEM106AQ96A25 262 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 DUX5Q96PT3 197 aa16.52■□□□□ 0.24
SS18-218ENST00000581021 TRBV23-1A0A0A0MS06 115 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 IGHV1-69DA0A0B4J2H0 117 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 MAGEA13PA6NCF6 341 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 DNAJC9-AS1A6NH13 148 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 PTGES3LE9PB15 166 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 RNASEK-C17orf49H0YIS7 233 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 K7N7A8 449 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 KDM4BO94953 1096 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 IGHV1-69P01742 117 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 HCKP08631 526 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 OCM2P0CE71 109 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 OCMP0CE72 109 aaPredicted RBP16.51■□□□□ 0.23
SS18-218ENST00000581021 SNU13P55769 128 aaKnown RBP16.51■□□□□ 0.23
SS18-218ENST00000581021 WNT4P56705 351 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 SLC35A2P78381 396 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 KLRD1Q13241 179 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 MED21Q13503 144 aa16.51■□□□□ 0.23
SS18-218ENST00000581021 DEFB112Q30KQ8 113 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms