RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 Q8N2B8 174 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 OR4C13Q8NGP0 309 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 OR13D1Q8NGV5 346 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 PIFOQ8TCI5 191 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 EME1Q96AY2 570 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 SPSB1Q96BD6 273 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 NPFFR1Q9GZQ6 430 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 ELL3Q9HB65 397 aaPredicted RBP11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 MTCH1Q9NZJ7 389 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 PITPNC1Q9UKF7 332 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 OAZ3Q9UMX2 235 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 GTF2A1LQ9UNN4 478 aa11.77□□□□□ -0.53
SMARCE1-216ENST00000580419 SNTNA6NMZ2 147 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 PLXNB1O43157 2135 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 TFF1P04155 84 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 ALPLP05186 524 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 PRKACBP22694 351 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 RBP2P50120 134 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 HERPUD1Q15011 391 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 SPIN3Q5JUX0 258 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 MINOS1Q5TGZ0 78 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 ZBTB49Q6ZSB9 765 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 FAM220AQ7Z4H9 259 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 AMIGO2Q86SJ2 522 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 C10orf67Q8IYJ2 551 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 OR2T6Q8NHC8 308 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 UBE2FQ969M7 185 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 RNF166Q96A37 237 aaPredicted RBP11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 BORCS8Q96FH0 119 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF488Q96MN9 340 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 MBOAT4Q96T53 435 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 LINC00312Q9Y6C7 94 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 MINOS1-NBL1R4GNA1 71 aa11.76□□□□□ -0.53
SMARCE1-216ENST00000580419 IGKV1-27A0A075B6S5 117 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 TRBV2A0A0J9YWF9 115 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 M0R129 80 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 ATP6V1E1P36543 226 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 POLR2IP36954 125 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 ATP1B3P54709 279 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 DLX1P56177 255 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 COL10A1Q03692 680 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 MRPL28Q13084 256 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF273Q14593 569 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 ZFP1Q6P2D0 407 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 Q6ZTK2 550 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 LHFPL2Q6ZUX7 228 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 GDPD3Q7L5L3 318 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 ANGPTL5Q86XS5 388 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 PRSS35Q8N3Z0 413 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 PNKDQ8N490 385 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 OR10H4Q8NGA5 316 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 OR2G2Q8NGZ5 317 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 MRPL48Q96GC5 212 aaKnown RBP11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 TTTY10Q9BZA0 68 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
SMARCE1-216ENST00000580419 LOC107986453A0A1B0GWG9 222 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 SLC16A6O15403 523 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 CIB2O75838 187 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 RPP14O95059 124 aaKnown RBP11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 CYB5AP00167 134 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 LMO1P25800 156 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 PEX2P28328 305 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 ACTA2P62736 377 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 ACTG2P63267 376 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF85Q03923 595 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 DMRTC1Q5HYR2 192 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 SAXO1Q8IYX7 474 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 PPP1R35Q8TAP8 253 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 C17orf50Q8WW18 174 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 NEK6Q9HC98 313 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 IMPAD1Q9NX62 359 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 GLS2Q9UI32 602 aa11.74□□□□□ -0.53
SMARCE1-216ENST00000580419 FAM230AA0A1W2PPH8 454 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 A0A1W2PRD5 423 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 A0A1W2PRF3 423 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 A0A1W2PRM7 423 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 FUOMA2VDF0 154 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 H3BUI4 141 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 MGST3O14880 152 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 MPZL2O60487 215 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 CSN2P05814 226 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 CCL3L1P16619 93 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 AZGP1P25311 298 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 ZNF91Q05481 1191 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 SLC25A26Q70HW3 274 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 ACBD7Q8N6N7 88 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 ASCC1Q8N9N2 400 aaKnown RBP11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 CORO2AQ92828 525 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 INPP5EQ9NRR6 644 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 OR14J1Q9UGF5 321 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 HHLA2Q9UM44 414 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
SMARCE1-216ENST00000580419 EXOGQ9Y2C4 368 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms