RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 A0A0A6YYH2 397 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 A6NJ64 397 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 NGFP01138 241 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 CALCRP30988 508 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TM4SF20Q53R12 229 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TMUB2Q71RG4 321 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 LINC00518Q8N0U6 118 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PTX4Q96A99 478 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ARL6Q9H0F7 186 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PLSCR4Q9NRQ2 329 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 GPR160Q9UJ42 338 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PROCRQ9UNN8 238 aa10.96□□□□□ -0.66
CDK5RAP3-217ENST00000580287 FAM221AA4D161 298 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SIGLEC5O15389 551 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SSBP1Q04837 148 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ATXN7L3Q14CW9 347 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 BEX5Q5H9J7 111 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 HSD17B13Q7Z5P4 300 aaPredicted RBP10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TMEM229BQ8NBD8 167 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR2AK2Q8NG84 335 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR14K1Q8NGZ2 314 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR1S1Q8NH92 325 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SEC22AQ96IW7 307 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SLC6A7Q99884 636 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TUBD1Q9UJT1 453 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PIGLQ9Y2B2 252 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 IL5P05113 134 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 KLRB1Q12918 225 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 GABRA6Q16445 453 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ZNF260Q3ZCT1 412 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 RNASE10Q5GAN6 216 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ZNF529Q6P280 563 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PNLDC1Q8NA58 520 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR10R2Q8NGX6 335 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PIGTQ969N2 578 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TMEM59Q9BXS4 323 aa10.95□□□□□ -0.66
CDK5RAP3-217ENST00000580287 IGKV1-9A0A0C4DH69 117 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 A0A0G2JNJ9 132 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TMEM82A0PJX8 343 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SNRPGP15A8MWD9 76 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SPDEFO95238 335 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PPP3CBP16298 524 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 GK2Q14410 553 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 NRN1LQ496H8 165 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SHEQ5VZ18 495 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR10K1Q8NGX5 313 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 AQP3Q92482 292 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 Q9UFV3 132 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 EEF1E1-BLOC1S5C9J1V9 151 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 DNASE2O00115 360 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 DHRS3O75911 302 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 EDN3P14138 238 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ACKR3P25106 362 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 IDH3GP51553 393 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 QRFPP83859 136 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ZNF92Q03936 586 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 KISS1Q15726 138 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 KCNG3Q8TAE7 436 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ST8SIA2Q92186 375 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 MRPS24Q96EL2 167 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 S100A13Q99584 98 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 EDARQ9UNE0 448 aa10.94□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TMEM14DPA8MWL7 114 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SOCS1O15524 211 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 CDC14BO60729 498 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SNAPC5O75971 98 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR4E1P0C645 316 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 CCL1P22362 96 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TIMP3P35625 211 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ATPAF1Q5TC12 328 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 DRAM2Q6UX65 266 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 GSG1LQ6UXU4 331 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 C22orf34Q6ZV56 151 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PDZD9Q8IXQ8 264 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 FAM169BQ8N8A8 192 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 KDF1Q8NAX2 398 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 RELL2Q8NC24 303 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 RAB3CQ96E17 227 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 LPAR5Q9H1C0 372 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR10A2Q9H208 303 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 TRGV8A0A0C4DH27 118 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 HMSDA8MTL9 139 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 DISC1C4P0D8 188 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 F5H5P2 479 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 PLATP00750 562 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 APOC3P02656 99 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SERPINA2P20848 420 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 CEACAM8P31997 349 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 HRH1P35367 487 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 UBE2NP61088 152 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 FAM27E3Q08E93 113 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ECH1Q13011 328 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 UBE2V2Q15819 145 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 SPATA46Q5T0L3 261 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 ZNF660Q6AZW8 331 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 OR13C8Q8NGS7 320 aa10.93□□□□□ -0.66
CDK5RAP3-217ENST00000580287 REEP6Q96HR9 211 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms