RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ZNF239Q16600 458 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 FAM27BQ5VT28 67 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 RPL7L1Q6DKI1 246 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 PPP1R32Q7Z5V6 425 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 GGNQ86UU5 652 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 FBXL14Q8N1E6 418 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 SFT2D1Q8WV19 159 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 PP6455Q8WZ26 134 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 PIGCQ92535 297 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 NMES1Q9C002 83 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 SH2D2AQ9NP31 389 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 BIN3Q9NQY0 253 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 MLXQ9UH92 298 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 R4GN57 208 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF705EA8MWA4 302 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 NTN3O00634 580 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 SYNGR3O43761 229 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 OR5H8P0DN80 308 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ADCYAP1P18509 176 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 GDF1P27539 372 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 TAS2R46P59540 309 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 RBMS3Q6XE24 437 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 PEG10Q86TG7 708 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 SULF2Q8IWU5 870 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 GPR137CQ8N3F9 429 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 OR1F12Q8NHA8 337 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 EMG1Q92979 244 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 MRPL24Q96A35 216 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 Q96M66 194 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 NUDT16L1Q9BRJ7 211 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF629Q9UEG4 869 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 PURGQ9UJV8 347 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 LSM5Q9Y4Y9 91 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 MED19A0JLT2 244 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 LRRC3CA6NJW4 275 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 HSPB6O14558 160 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 LRP3O75074 770 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 VAMP5O95183 116 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 TPT1P13693 172 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 NME2P22392 152 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 CRYGSP22914 178 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 FOXG1P55316 489 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 RAC3P60763 192 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 MRPS34P82930 218 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 SPEM2Q0P670 501 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 RBM39Q14498 530 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 ACTBL2Q562R1 376 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 SKA3Q8IX90 412 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 M1APQ8TC57 530 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 RAB18Q9NP72 206 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 P4HTMQ9NXG6 502 aa9.11□□□□□ -0.95
TOP3A-209ENST00000580095 C14orf166Q9Y224 244 aaKnown RBP9.11□□□□□ -0.95
TOP3A-209ENST00000580095 NCKAP5O14513 1909 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 SERPINE3A8MV23 424 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 H7C2Y5 167 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 LAMTOR5O43504 91 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 DIRAS3O95661 229 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 FBP1P09467 338 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF806P0C7X5 589 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 HIST1H3AP68431 136 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 ACER2Q5QJU3 275 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 HIST2H3PS2Q5TEC6 136 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 HIST2H3AQ71DI3 136 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 SLC16A14Q7RTX9 510 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 CBLN2Q8IUK8 224 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 EIF4E3Q8N5X7 224 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 POC1AQ8NBT0 407 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 OR11L1Q8NGX0 322 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 CA5BP1Q8WTZ4 195 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 BORCS8Q96FH0 119 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 BSCL2Q96G97 398 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 TSNAXQ99598 290 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 CMSS1Q9BQ75 279 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 TMEM38BQ9NVV0 291 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 CRIM1Q9NZV1 1036 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 TCFL5Q9UL49 500 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 MAP1BP46821 2468 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 TTC28Q96AY4 2481 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 EP300Q09472 2414 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 SPENQ96T58 3664 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 ZNF716A6NP11 495 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 SLC33A1O00400 549 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 ATG12O94817 140 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 IFNA2P01563 188 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 IFNA4P05014 189 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 NDUFB7P17568 137 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 S100PP25815 95 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 NPBWR2P48146 333 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 IGFBP7Q16270 282 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 PRSS54Q6PEW0 395 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 PUSL1Q8N0Z8 303 aaKnown RBP9.1□□□□□ -0.95
TOP3A-209ENST00000580095 OR10AD1Q8NGE0 317 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 OR5L1Q8NGL2 311 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 OR4A4PQ8NGN8 299 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 C2orf50Q96LR7 162 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 FOXB1Q99853 325 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 TREM1Q9NP99 234 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 NDRG3Q9UGV2 375 aa9.1□□□□□ -0.95
TOP3A-209ENST00000580095 TMEM238LA0A1B0GVL6 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms