RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 RNF212BA8MTL3 300 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 F8VVB4 439 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 F8VWA3 439 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 MYL12BO14950 172 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 TOX4O94842 621 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 VENTXO95231 258 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 ATP6V1G2O95670 118 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 CDK1P06493 297 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 SFTPBP07988 381 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 CEBPDP49716 269 aaPredicted RBP11.92□□□□□ -0.5
MKS1-207ENST00000578789 WNT4P56705 351 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 TAS2R43P59537 309 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 SRSF2Q01130 221 aaKnown RBP11.92□□□□□ -0.5
MKS1-207ENST00000578789 PDZK1IP1Q13113 114 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 IZUMO2Q6UXV1 221 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 TMEM185AQ8NFB2 350 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 SEBOXQ9HB31 216 aaPredicted RBP11.92□□□□□ -0.5
MKS1-207ENST00000578789 ZNF281Q9Y2X9 895 aa11.92□□□□□ -0.5
MKS1-207ENST00000578789 TRBV23-1A0A0A0MS06 115 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 IGKV1-12A0A0C4DH73 117 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 TRBV5-5A0A0J9YX44 114 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 KDM4BO94953 1096 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 CYB5AP00167 134 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 IGKV1D-12P01611 117 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 CD1AP06126 327 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 CD2P06729 351 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 OCM2P0CE71 109 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 OCMP0CE72 109 aaPredicted RBP11.91□□□□□ -0.5
MKS1-207ENST00000578789 NDUFB7P17568 137 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 SOX2P48431 317 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 BPIFB3P59826 476 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 ZP1P60852 638 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 ARF6P62330 175 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 BDH1Q02338 343 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 DOC2BQ14184 412 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 PDCD1Q15116 288 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 RNF144BQ7Z419 303 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 SAXO1Q8IYX7 474 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 NANOGP1Q8N7R0 232 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 C22orf15Q8WYQ4 148 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 H1FXQ92522 213 aaKnown RBP11.91□□□□□ -0.5
MKS1-207ENST00000578789 RFT1Q96AA3 541 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 SPACA5Q96QH8 159 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 JMJD8Q96S16 334 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 CDCA4Q9BXL8 241 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 MS4A7Q9GZW8 240 aaPredicted RBP11.91□□□□□ -0.5
MKS1-207ENST00000578789 FAM234AQ9H0X4 552 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
MKS1-207ENST00000578789 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 PAK1IP1Q9NWT1 392 aaPredicted RBP11.91□□□□□ -0.5
MKS1-207ENST00000578789 SCN3BQ9NY72 215 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 OR14J1Q9UGF5 321 aa11.91□□□□□ -0.5
MKS1-207ENST00000578789 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 IGHV3OR16-10A0A075B7F0 116 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 SPRY1O43609 319 aaPredicted RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 ZNF737O75373 536 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 HCKP08631 526 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 RAB3AP20336 220 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 BCL3P20749 454 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 NPBWR2P48146 333 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 RPS11P62280 158 aaKnown RBP eCLIP11.9□□□□□ -0.5
MKS1-207ENST00000578789 SLC35A2P78381 396 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 ACSM1Q08AH1 577 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 ZNF146Q15072 292 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 KISS1Q15726 138 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 YIF1BQ5BJH7 314 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 GPR157Q5UAW9 335 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 METAP1DQ6UB28 335 aaPredicted RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 PHC2Q8IXK0 858 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 CMTM4Q8IZR5 234 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 BCL6BQ8N143 479 aaPredicted RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 ZFP41Q8N8Y5 198 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 ZSCAN4Q8NAM6 433 aaPredicted RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 OR51A2Q8NGJ7 313 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 GHSRQ92847 366 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 EMG1Q92979 244 aaKnown RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 MYDGFQ969H8 173 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 TMEM106AQ96A25 262 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 CPNE2Q96FN4 548 aaPredicted RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 RBFOX1Q9NWB1 397 aaKnown RBP11.9□□□□□ -0.5
MKS1-207ENST00000578789 TAS2R4Q9NYW5 299 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 ONECUT1Q9UBC0 465 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 ERGIC3Q9Y282 383 aa11.9□□□□□ -0.5
MKS1-207ENST00000578789 CENPVL3A0A0U1RRI6 287 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 K7N7A8 449 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 M0R1W7 72 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 ANGPTL7O43827 346 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 RGS9O75916 674 aaPredicted RBP11.89□□□□□ -0.51
MKS1-207ENST00000578789 TK1P04183 234 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 CHRM2P08172 466 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 CAPZA1P52907 286 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 COL10A1Q03692 680 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 IRF3Q14653 427 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 Q499Y3 187 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 SPIN3Q5JUX0 258 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 FIP1L1Q6UN15 594 aaKnown RBP11.89□□□□□ -0.51
MKS1-207ENST00000578789 C1orf122Q6ZSJ8 110 aa11.89□□□□□ -0.51
MKS1-207ENST00000578789 VMO1Q7Z5L0 202 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms