RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 SLAMF9Q96A28 289 aa18.78■□□□□ 0.6
VAPA-205ENST00000578314 DPAGT1Q9H3H5 408 aa18.78■□□□□ 0.6
VAPA-205ENST00000578314 C1RLQ9NZP8 487 aa18.78■□□□□ 0.6
VAPA-205ENST00000578314 A0A1W2PPH5 198 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 NDUFA7O95182 113 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 MDKP21741 143 aaPredicted RBP18.77■□□□□ 0.6
VAPA-205ENST00000578314 OMGP23515 440 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 ZSCAN26Q16670 478 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 LPCAT4Q643R3 524 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 OR10AC1Q8NH08 325 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 APH1BQ8WW43 257 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 ISG20L2Q9H9L3 353 aaKnown RBP18.77■□□□□ 0.6
VAPA-205ENST00000578314 ERVK13-1Q9NX77 482 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 SMPD3Q9NY59 655 aaPredicted RBP18.77■□□□□ 0.6
VAPA-205ENST00000578314 ZNRD1Q9P1U0 126 aa18.77■□□□□ 0.6
VAPA-205ENST00000578314 SF3B6Q9Y3B4 125 aaKnown RBP18.77■□□□□ 0.6
VAPA-205ENST00000578314 A0A1B0GUS0 222 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 A0A1W2PRD5 423 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 A0A1W2PRF3 423 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 A0A1W2PRM7 423 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 ZNF737O75373 536 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 ZNF20P17024 532 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 AZGP1P25311 298 aaKnown RBP18.76■□□□□ 0.59
VAPA-205ENST00000578314 SAA4P35542 130 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 MTCP1P56278 107 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 RELBQ01201 579 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 COL10A1Q03692 680 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 KLHL22Q53GT1 634 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 MKXQ8IYA7 352 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 Q8IYB0 196 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 PNKDQ8N490 385 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 OR4M1Q8NGD0 313 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 OR51A4Q8NGJ6 313 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 OR52I1Q8NGK6 324 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 STMN2Q93045 179 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 SPSB1Q96BD6 273 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 SLITRK2Q9H156 845 aa18.76■□□□□ 0.59
VAPA-205ENST00000578314 PKD1L1Q8TDX9 2849 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 MEIOCA2RUB1 952 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 MT-ND2P03891 347 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 RPSAP08865 295 aaKnown RBP18.75■□□□□ 0.59
VAPA-205ENST00000578314 RAG2P55895 527 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 MRPL28Q13084 256 aaKnown RBP18.75■□□□□ 0.59
VAPA-205ENST00000578314 LHFPL2Q6ZUX7 228 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 ZNF676Q8N7Q3 588 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 ZNF555Q8NEP9 628 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 OR4F5Q8NH21 305 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 BEX1Q9HBH7 125 aa18.75■□□□□ 0.59
VAPA-205ENST00000578314 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.75■□□□□ 0.59
VAPA-205ENST00000578314 GPR137BO60478 399 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 WBP4O75554 376 aaKnown RBP18.74■□□□□ 0.59
VAPA-205ENST00000578314 INMTO95050 263 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 TAF9Q16594 264 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 MIDNQ504T8 468 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 OR13C3Q8NGS6 347 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 HAVCR2Q8TDQ0 301 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 OPALINQ96PE5 141 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 JAM3Q9BX67 310 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 HEXA-AS1Q9H8Q6 139 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 MGAM2Q2M2H8 2515 aa18.74■□□□□ 0.59
VAPA-205ENST00000578314 TRBV2A0A0J9YWF9 115 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 hCG_1809904A0A1W2PP81 198 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 A0A1W2PPE2 198 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 A0A1W2PR64 198 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 A0A1W2PRV1 198 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 E9PI62 339 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 ZFPL1O95159 310 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 CYB5AP00167 134 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 NPBWR2P48146 333 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 PDZK1IP1Q13113 114 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 ZNF273Q14593 569 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 GDPGP1Q6ZNW5 385 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 ASCC1Q8N9N2 400 aaKnown RBP18.73■□□□□ 0.59
VAPA-205ENST00000578314 EMG1Q92979 244 aaKnown RBP18.73■□□□□ 0.59
VAPA-205ENST00000578314 AJUBAQ96IF1 538 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 SNX22Q96L94 193 aa18.73■□□□□ 0.59
VAPA-205ENST00000578314 FGF20Q9NP95 211 aaPredicted RBP18.73■□□□□ 0.59
VAPA-205ENST00000578314 TMEM82A0PJX8 343 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 TMEM212A6NML5 194 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 ANGPTL7O43827 346 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 ALX3O95076 343 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 PAHP00439 452 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 LIMS3P0CW19 117 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 LIMS4P0CW20 117 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 CCL3L1P16619 93 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 POU3F4P49335 361 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 DLX6P56179 175 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 ZNF146Q15072 292 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 SMN1Q16637 294 aaKnown RBP18.72■□□□□ 0.59
VAPA-205ENST00000578314 C17orf107Q6ZR85 190 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 OR8H2Q8N162 312 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 FAM58AQ8N1B3 248 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 BEND2Q8NDZ0 799 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 ZCCHC4Q9H5U6 513 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 C8orf4Q9NR00 106 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 RBFOX1Q9NWB1 397 aaKnown RBP18.72■□□□□ 0.59
VAPA-205ENST00000578314 MEGF8Q7Z7M0 2845 aa18.72■□□□□ 0.59
VAPA-205ENST00000578314 C17orf98A8MV24 154 aa18.71■□□□□ 0.59
VAPA-205ENST00000578314 HAND1O96004 215 aa18.71■□□□□ 0.59
VAPA-205ENST00000578314 CCDC159P0C7I6 412 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms