RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 ARSBP15848 533 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 ZNF182P17025 639 aaPredicted RBP9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 GLRA1P23415 457 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 COL8A2P25067 703 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 DGUOKQ16854 277 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 HES5Q5TA89 166 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 ELP2Q6IA86 826 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 OR2W3Q7Z3T1 314 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 RNF144BQ7Z419 303 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 NR2C2APQ86WQ0 139 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 Q8NFD4 153 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 KCNG3Q8TAE7 436 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 DYNC2LI1Q8TCX1 351 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 ACOT12Q8WYK0 555 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 RAB1CQ92928 201 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 EMG1Q92979 244 aaKnown RBP9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 YIPF5Q969M3 257 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 SLC25A28Q96A46 364 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 FAM3DQ96BQ1 224 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 PERPQ96FX8 193 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 HES4Q9HCC6 221 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 MTCH1Q9NZJ7 389 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 ABRACLQ9P1F3 81 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 FBLN5Q9UBX5 448 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 USF3Q68DE3 2245 aa9.41□□□□□ -0.9
TRAPPC8-204ENST00000578252 PPIAL4EA0A075B759 164 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 TRAV38-1A0A0B4J264 116 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 SMIM30A4D0T7 59 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 PPIAL4DF5H284 164 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 H3BUI4 141 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 LGALS8O00214 317 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 LY6HO94772 140 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 CYB5R3P00387 301 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 KNG1P01042 644 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 PPIAL4FP0DN26 164 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 GTF2F2P13984 249 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 MUC1P15941 1255 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 GIFP27352 417 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 CAV3P56539 151 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 FGF12P61328 243 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 P2RY14Q15391 338 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 MICBQ29980 383 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 SLC22A6Q4U2R8 563 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 NHLRC3Q5JS37 347 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 SPIN3Q5JUX0 258 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 IDNKQ5T6J7 187 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 TEX36Q5VZQ5 186 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 ACP7Q6ZNF0 438 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 C1QL2Q7Z5L3 287 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 LINC00596Q86U02 117 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 FAM58AQ8N1B3 248 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 OSR2Q8N2R0 312 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 MUC20Q8N307 709 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 OR51D1Q8NGF3 324 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 PTX4Q96A99 478 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 C1orf147Q96MC9 270 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 PIMREGQ9BSJ6 248 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 LIN7BQ9HAP6 207 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 SEBOXQ9HB31 216 aaPredicted RBP9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 HMG20AQ9NP66 347 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 TREM2Q9NZC2 230 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 DNAJB11Q9UBS4 358 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 GLS2Q9UI32 602 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 PPIAL4AQ9Y536 164 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 ETV7Q9Y603 341 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 CACNG2Q9Y698 323 aa9.4□□□□□ -0.9
TRAPPC8-204ENST00000578252 OOEPA6NGQ2 149 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 LYNX1G3V0Z9 82 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 NDUFA2O43678 99 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 CRTAPO75718 401 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 HTR3BO95264 441 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 SFTPBP07988 381 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 LYNX1P0DP58 116 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 SLC2A2P11168 524 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 PRKACAP17612 351 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 RAB6AP20340 208 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 BCL3P20749 454 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 SERPINA2P20848 420 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 CD80P33681 288 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 MDH2P40926 338 aaKnown RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 GPR6P46095 362 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 NPBWR2P48146 333 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 BTG1P62324 171 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 IL13RA2Q14627 380 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 CARTPTQ16568 116 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 C2orf76Q3KRA6 126 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 MZT2AQ6P582 158 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 PRSS57Q6UWY2 283 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 BOLLQ8N9W6 283 aaKnown RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 OR51T1Q8NGJ9 327 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 FAM168AQ92567 244 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 ZNF488Q96MN9 340 aa9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 NKX3-1Q99801 234 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 URM1Q9BTM9 101 aaKnown RBP9.39□□□□□ -0.91
TRAPPC8-204ENST00000578252 TMEM59Q9BXS4 323 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms