RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 PNRC2Q9NPJ4 139 aaKnown RBP12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 FAM212BQ9NTI7 297 aaPredicted RBP12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 C7orf77A4D0Y5 90 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 FAM24AA6NFZ4 105 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 NAAAQ02083 359 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 PDZD11Q5EBL8 140 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 UBALD1Q8TB05 177 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 SPTSSAQ969W0 71 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 UBE2J1Q9Y385 318 aaPredicted RBP12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 CACNA1DQ01668 2161 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 JTBO76095 146 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 ZNF84P51523 738 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 NCMAPQ5T1S8 102 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 PLCXD3Q63HM9 321 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 PRR18Q8N4B5 295 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 ZNF565Q8N9K5 539 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 OR14L1PQ8NHC6 308 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 RNASE11Q8TAA1 199 aaKnown RBP12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 TMEM100Q9NV29 134 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 ST3GAL6Q9Y274 331 aa12.85□□□□□ -0.35
CUEDC1-206ENST00000577830 PPP1CCP36873 323 aaKnown RBP12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 TMEM268Q5VZI3 342 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 RPUSD3Q6P087 351 aaKnown RBP12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 UCK1Q9HA47 277 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 EML6Q6ZMW3 1958 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 SVILO95425 2214 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 TRBV23-1A0A0A0MS06 115 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 FIGNL2A6NMB9 653 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 GNRHRP30968 328 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 OIT3Q8WWZ8 545 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 CCDC74BQ96LY2 380 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 RARRES2Q99969 163 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 ABHD14AQ9BUJ0 271 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 MRPS17Q9Y2R5 130 aaKnown RBP12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 CARHSP1Q9Y2V2 147 aaKnown RBP12.84□□□□□ -0.35
CUEDC1-206ENST00000577830 SERPINE3A8MV23 424 aa12.83□□□□□ -0.35
CUEDC1-206ENST00000577830 IGLV3-19P01714 112 aa12.83□□□□□ -0.35
CUEDC1-206ENST00000577830 CD37P11049 281 aa12.83□□□□□ -0.35
CUEDC1-206ENST00000577830 RPS10P46783 165 aaKnown RBP12.83□□□□□ -0.35
CUEDC1-206ENST00000577830 TMEM131Q92545 1883 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 PRSS44E7EML9 344 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 APOC1P02654 83 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 FBP1P09467 338 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 RPS2P15880 293 aaKnown RBP12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 DVL1P1P54792 670 aaPredicted RBP12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 POLR2GP62487 172 aaKnown RBP eCLIP12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 SHBQ15464 509 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 FAM189A2Q15884 450 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 HAS2Q92819 552 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 HLA-CQ95604 372 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 A0A096LPE4 126 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 TRBV6-7A0A0A0MS04 114 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 A0A1W2PPZ6 126 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 A0A1W2PQM1 296 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 AQP7P3A6NL99 342 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 SSSCA1O60232 199 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 PTGDSP41222 190 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 GLP1RP43220 463 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 GSK3AP49840 483 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 SULT1A2P50226 295 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 SUMO3P55854 103 aaPredicted RBP12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 GNMTQ14749 295 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 IFT22Q9H7X7 185 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 WFDC1Q9HC57 220 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 NECAP2Q9NVZ3 263 aa12.83□□□□□ -0.36
CUEDC1-206ENST00000577830 ZNF727A8MUV8 499 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 DEDDO75618 318 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 PTAFRP25105 342 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 ENDOGQ14249 297 aaKnown RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 LHFPL1Q86WI0 220 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 LUZP4Q9P127 313 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 WRBO00258 174 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 HSD17B6O14756 317 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 ZNF32P17041 273 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 MSX1P28360 303 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 SLC25A26Q70HW3 274 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 VASH2Q86V25 355 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 MYPOPQ86VE0 399 aaPredicted RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 SAT2Q96F10 170 aaPredicted RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 SPSB2Q99619 263 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 SLC2A9Q9NRM0 540 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 C19orf25Q9UFG5 118 aaPredicted RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 SLC7A11Q9UPY5 501 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 LRP4O75096 1905 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 A0A1W2PNV4 684 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 COLCA2A8K830 154 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 CXCL13O43927 109 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 ACAA1P09110 424 aaPredicted RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 OTX2P32243 289 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 THBS4P35443 961 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 RPS18P62269 152 aaKnown RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 VAMP2P63027 116 aa12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 HABP2Q14520 560 aaPredicted RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 ZNF468Q5VIY5 522 aaPredicted RBP12.82□□□□□ -0.36
CUEDC1-206ENST00000577830 C17orf82Q86X59 251 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms