RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SPEF1Q9Y4P9 236 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 MPC1Q9Y5U8 109 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 NBEAL1Q6ZS30 2694 aa8.67□□□□□ -1.02
SS18-207ENST00000577636 A0A096LNT2 108 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 A0A1W2PR80 420 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 E7EQL1 145 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 WIPF1O43516 503 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 ORC5O43913 435 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 ICMTO60725 284 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 CDC14BO60729 498 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 CST4P01036 141 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 LPLP06858 475 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 ANOS1P23352 680 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 GDNFP39905 211 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 FABP6P51161 128 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 BCAP31P51572 246 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 PPP1CBP62140 327 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 SNTB2Q13425 540 aaKnown RBP8.66□□□□□ -1.02
SS18-207ENST00000577636 SLC22A6Q4U2R8 563 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 TIMM23BQ5SRD1 257 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 SLC22A25Q6T423 547 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 FBXL14Q8N1E6 418 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 OR56B2PQ8NGI1 322 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 OR51T1Q8NGJ9 327 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 OR5D18Q8NGL1 313 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 TRIM63Q969Q1 353 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 NKX3-1Q99801 234 aaPredicted RBP8.66□□□□□ -1.02
SS18-207ENST00000577636 BCL2L14Q9BZR8 327 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 DPAGT1Q9H3H5 408 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 AUNIPQ9H7T9 357 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 TMEM160Q9NX00 188 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 KCNS2Q9ULS6 477 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 RHBDD3Q9Y3P4 386 aa8.66□□□□□ -1.02
SS18-207ENST00000577636 FUOMA2VDF0 154 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 CD300LBA8K4G0 201 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 TMEM14DPA8MWL7 114 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 H3BUI4 141 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 PLA2G10O15496 165 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 LY6HO94772 140 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 NGFP01138 241 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 IGKV3-15P01624 115 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 NAT2P11245 290 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 GTF2F2P13984 249 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 RAC2P15153 192 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 SLC25A16P16260 332 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 USF1P22415 310 aaPredicted RBP8.65□□□□□ -1.02
SS18-207ENST00000577636 CPT2P23786 658 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 GCH1P30793 250 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 RCVRNP35243 200 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 WNT5AP41221 380 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 VEGFCP49767 419 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 ZNF83P51522 516 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 UCP2P55851 309 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 RPS27AP62979 156 aaKnown RBP8.65□□□□□ -1.02
SS18-207ENST00000577636 PRDX4Q13162 271 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 HLXQ14774 488 aaPredicted RBP8.65□□□□□ -1.02
SS18-207ENST00000577636 CARTPTQ16568 116 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 CEACAM21Q3KPI0 293 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 CDNFQ49AH0 187 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 FAM120AOSQ5T036 256 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 OR10K2Q6IF99 312 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 FBXW12Q6X9E4 464 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 MUC15Q8N387 334 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 OR1J1Q8NGS3 322 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 RAB3CQ96E17 227 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 MRPS24Q96EL2 167 aaKnown RBP8.65□□□□□ -1.02
SS18-207ENST00000577636 C1QTNF6Q9BXI9 259 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 OR51B6Q9H340 312 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 KCNK15Q9H427 330 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 NKIRAS2Q9NYR9 191 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 NPAP1Q9NZP6 1156 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 ATP23Q9Y6H3 246 aa8.65□□□□□ -1.02
SS18-207ENST00000577636 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 H7C417 338 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 M0R1B8 84 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 LANCL1O43813 399 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 HTR3BO95264 441 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 DHFRP00374 187 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 CRYAAP02489 173 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 GSTP1P09211 210 aaKnown RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 FAM157BP0CG42 384 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MGMTP16455 207 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 SERPINA2P20848 420 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 RFX2P48378 723 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 GZMKP49863 264 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 GNG2P59768 71 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MRPS15P82914 257 aaKnown RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 QRFPP83859 136 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 PLA2G7Q13093 441 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 UNC119Q13432 240 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 PCGF3Q3KNV8 242 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 C3orf36Q3SXR2 165 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 SEZ6L2Q6UXD5 910 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 Q6ZTK2 550 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms