RNA–Protein interactions for RNA: ENST00000577315.5

MKS1-205, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-205ENST00000577315 GDPD3Q7L5L3 318 aa12.14□□□□□ -0.47
MKS1-205ENST00000577315 EME1Q96AY2 570 aa12.14□□□□□ -0.47
MKS1-205ENST00000577315 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
MKS1-205ENST00000577315 AJUBAQ96IF1 538 aa12.14□□□□□ -0.47
MKS1-205ENST00000577315 MYCBPQ99417 103 aaPredicted RBP12.14□□□□□ -0.47
MKS1-205ENST00000577315 CDCA4Q9BXL8 241 aa12.14□□□□□ -0.47
MKS1-205ENST00000577315 IMPAD1Q9NX62 359 aa12.14□□□□□ -0.47
MKS1-205ENST00000577315 MTCH1Q9NZJ7 389 aa12.14□□□□□ -0.47
MKS1-205ENST00000577315 MEGF8Q7Z7M0 2845 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 LOC107986453A0A1B0GWG9 222 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 SNTNA6NMZ2 147 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 VGLL3A8MV65 326 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 ZNF737O75373 536 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 POLR2IP36954 125 aaKnown RBP12.13□□□□□ -0.47
MKS1-205ENST00000577315 RBP2P50120 134 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 ISL1P61371 349 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 ZNF273Q14593 569 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 HERPUD1Q15011 391 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 LY6EQ16553 131 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 Q6ZTK2 550 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 EGFL6Q8IUX8 553 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 OR8H2Q8N162 312 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 BATF2Q8N1L9 274 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 OR2T6Q8NHC8 308 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 PPP1R35Q8TAP8 253 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 C17orf50Q8WW18 174 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 MALSU1Q96EH3 234 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
MKS1-205ENST00000577315 NPFFR1Q9GZQ6 430 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 GLS2Q9UI32 602 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 GNG8Q9UK08 70 aa12.13□□□□□ -0.47
MKS1-205ENST00000577315 hADV38S2A0JD32 116 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 FAM90A8PA6NJQ4 464 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 SAC3D1A6NKF1 404 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 PLXNB1O43157 2135 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 APOL3O95236 402 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 PRKACBP22694 351 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 COX7A1P24310 79 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 PEX2P28328 305 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 BMXP51813 675 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 EFNB2P52799 333 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 DLX6P56179 175 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 EDDM3BP56851 147 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 ZNF85Q03923 595 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 SLC25A30Q5SVS4 291 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 CRIP3Q6Q6R5 217 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 SLC25A26Q70HW3 274 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 UTS2BQ765I0 119 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 PRSS35Q8N3Z0 413 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 EMG1Q92979 244 aaKnown RBP12.12□□□□□ -0.47
MKS1-205ENST00000577315 SLAMF9Q96A28 289 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 HRASLS5Q96KN8 279 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 NEK6Q9HC98 313 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 ABCB10Q9NRK6 738 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 PITPNC1Q9UKF7 332 aa12.12□□□□□ -0.47
MKS1-205ENST00000577315 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 ARG1P05089 322 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 ISG15P05161 165 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 RPSAP08865 295 aaKnown RBP12.11□□□□□ -0.47
MKS1-205ENST00000577315 CSF1P09603 554 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 PIPP12273 146 aaPredicted RBP12.11□□□□□ -0.47
MKS1-205ENST00000577315 TP53I3Q53FA7 332 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 ZNF626Q68DY1 528 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 FDX2Q6P4F2 183 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 ZNF782Q6ZMW2 699 aaPredicted RBP12.11□□□□□ -0.47
MKS1-205ENST00000577315 LHFPL2Q6ZUX7 228 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 C10orf67Q8IYJ2 551 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 OR11H6Q8NGC7 330 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 OR2G2Q8NGZ5 317 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 SPSB1Q96BD6 273 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 ZNF714Q96N38 554 aa12.11□□□□□ -0.47
MKS1-205ENST00000577315 CMYA5Q8N3K9 4069 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 TRBV2A0A0J9YWF9 115 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 DAPL1A0PJW8 107 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ODF3BA8MYP8 253 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 H3BSH0 61 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 H3BUI4 141 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 HAND1O96004 215 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ALPLP05186 524 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 HTR1AP08908 422 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 OCM2P0CE71 109 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 OCMP0CE72 109 aaPredicted RBP12.1□□□□□ -0.47
MKS1-205ENST00000577315 IGHV1-8P0DP01 117 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ZNF20P17024 532 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ATF1P18846 271 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 AZGP1P25311 298 aaKnown RBP12.1□□□□□ -0.47
MKS1-205ENST00000577315 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 CCR9P51686 369 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 MTCP1P56278 107 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 SNRPGP62308 76 aaKnown RBP12.1□□□□□ -0.47
MKS1-205ENST00000577315 ZNF91Q05481 1191 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ZNF146Q15072 292 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ZFP1Q6P2D0 407 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 ZBTB49Q6ZSB9 765 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 FAM58AQ8N1B3 248 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 RPS4Y2Q8TD47 263 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 RHOFQ9HBH0 211 aa12.1□□□□□ -0.47
MKS1-205ENST00000577315 HHLA2Q9UM44 414 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms