RNA–Protein interactions for RNA: ENST00000576149.5

VPS53-220, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 5

Gene VPS53, Length 2,444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-220ENST00000576149 MRPL33O75394 65 aaKnown RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 KNG1P01042 644 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 IFNA2P01563 188 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 IGHV3-9P01782 118 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 CTSDP07339 412 aaPredicted RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 CELA3AP09093 270 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 SP9P0CG40 484 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 EDN3P14138 238 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 RFC3P40938 356 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 PDZK1IP1Q13113 114 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 PABPC1L2AQ5JQF8 200 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 SLC38A6Q8IZM9 456 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 STPG2Q8N412 459 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 POC1AQ8NBT0 407 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 CPEB3Q8NE35 698 aaKnown RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 MRPS24Q96EL2 167 aaKnown RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 CMSS1Q9BQ75 279 aaKnown RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 SULT4A1Q9BR01 284 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 C1QTNF5Q9BXJ0 243 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 PRDM14Q9GZV8 571 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 IL36GQ9NZH8 169 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 B4GALT7Q9UBV7 327 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 ZDBF2Q9HCK1 2354 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 ZNF816-ZNF321PA0A0X1KG74 233 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 ZNF587BE7ETH6 402 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 GEMIN2O14893 280 aaKnown RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 OR5H8P0DN80 308 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 CD59P13987 128 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 RRADP55042 308 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 CLDN18P56856 261 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 PPIAP62937 165 aaKnown RBP8.73□□□□□ -1.01
VPS53-220ENST00000576149 NAAAQ02083 359 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 SRYQ05066 204 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 PIGYQ3MUY2 71 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 TM4SF20Q53R12 229 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 CDCP2Q5VXM1 449 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 COLCA1Q6ZS62 124 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 OSR2Q8N2R0 312 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 BHLHE23Q8NDY6 225 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 OR10AD1Q8NGE0 317 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 TECTBQ96PL2 329 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 HES7Q9BYE0 225 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 CYTL1Q9NRR1 136 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 SLC7A10Q9NS82 523 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 COQ3Q9NZJ6 369 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 OR5AC2Q9NZP5 309 aa8.73□□□□□ -1.01
VPS53-220ENST00000576149 SFTPBP07988 381 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 FCGR3AP08637 254 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 OPRM1P35372 400 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 RBMXP38159 391 aaKnown RBP8.72□□□□□ -1.01
VPS53-220ENST00000576149 ARF1P84077 181 aaKnown RBP8.72□□□□□ -1.01
VPS53-220ENST00000576149 PLCXD3Q63HM9 321 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 DHRS11Q6UWP2 260 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 FBXL14Q8N1E6 418 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 SLC30A7Q8NEW0 376 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 ADAMTS17Q8TE56 1095 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 PIGCQ92535 297 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 LIME1Q9H400 295 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 BCO1Q9HAY6 547 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 PARPBPQ9NWS1 579 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 C1orf123Q9NWV4 160 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 ABI3Q9P2A4 366 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 CNTRLQ7Z7A1 2325 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 MSGN1A6NI15 193 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 RPL36A-HNRNPH2H7BZ11 118 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 HOXB5P09067 269 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 TPT1P13693 172 aaKnown RBP8.72□□□□□ -1.01
VPS53-220ENST00000576149 ZNF708P17019 499 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 RAB32Q13637 225 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 OR1C1Q15619 314 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 DCAF10Q5QP82 559 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 PLA2G2CQ5R387 149 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 SGPP2Q8IWX5 399 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.72□□□□□ -1.01
VPS53-220ENST00000576149 AQP10Q96PS8 301 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 TTTY12Q9BZ98 90 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 NECAP2Q9NVZ3 263 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 TAS2R3Q9NYW6 316 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 ST3GAL6Q9Y274 331 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 DOCK10Q96BY6 2186 aa8.72□□□□□ -1.01
VPS53-220ENST00000576149 CRYM-AS1A6NIL9 109 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 FGF16O43320 207 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 PET100P0DJ07 73 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 MAGEA5P43359 124 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 RBM39Q14498 530 aaKnown RBP8.71□□□□□ -1.01
VPS53-220ENST00000576149 ELP2Q6IA86 826 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 TUSC5Q8IXB3 177 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 BAP18Q8IXM2 172 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 OR51F2Q8NH61 342 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 LOXL4Q96JB6 756 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 ACKR4Q9NPB9 350 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 PCDHB16Q9NRJ7 776 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 DNAJB11Q9UBS4 358 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 GLS2Q9UI32 602 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 MEMO1Q9Y316 297 aa8.71□□□□□ -1.01
VPS53-220ENST00000576149 ZNF850A8MQ14 1090 aa8.71□□□□□ -1.02
VPS53-220ENST00000576149 M0R296 226 aa8.71□□□□□ -1.02
VPS53-220ENST00000576149 CDX4O14627 284 aaPredicted RBP8.71□□□□□ -1.02
VPS53-220ENST00000576149 PRKACAP17612 351 aa8.71□□□□□ -1.02
VPS53-220ENST00000576149 ITGA3P26006 1051 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms