RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 TMEM182Q6ZP80 229 aaPredicted RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 LHFPL2Q6ZUX7 228 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 LRTM2Q8N967 370 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 TMEM54Q969K7 222 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 IP6K3Q96PC2 410 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 RASL10BQ96S79 203 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SPIN2AQ99865 258 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SPIN2BQ9BPZ2 258 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SMDT1Q9H4I9 107 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SLC2A9Q9NRM0 540 aa9.39□□□□□ -0.91
CCDC40-207ENST00000572253 RCL1Q9Y2P8 373 aaKnown RBP9.39□□□□□ -0.91
CCDC40-207ENST00000572253 SPRY1O43609 319 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-207ENST00000572253 UCP2P55851 309 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 RBMS3Q6XE24 437 aaKnown RBP9.38□□□□□ -0.91
CCDC40-207ENST00000572253 FAM24BQ8N5W8 94 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 ANGPTL4Q9BY76 406 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 SLC7A11Q9UPY5 501 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 CABIN1Q9Y6J0 2220 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 hCG_1809904A0A1W2PP81 198 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 A0A1W2PR64 198 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 A0A1W2PRV1 198 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 TXNL1O43396 289 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 LCATP04180 440 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 OR13C7P0DN81 318 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 DAOP14920 347 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 MALLQ13021 153 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 FADS6Q8N9I5 356 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 REEP6Q96HR9 211 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 A0A1B0GV50 99 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 AP4M1O00189 453 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 DBHP09172 617 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 FOSL1P15407 271 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 KLK2P20151 261 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 ACKR3P25106 362 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 VAMP2P63027 116 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 RAB35Q15286 201 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 CRIP3Q6Q6R5 217 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 WDSUB1Q8N9V3 476 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 SGK3Q96BR1 496 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 WFDC1Q9HC57 220 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 DKKL1Q9UK85 242 aa9.38□□□□□ -0.91
CCDC40-207ENST00000572253 FER1L5A0AVI2 2057 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 NQO2P16083 231 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 OTX1P32242 354 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 EIF2S3P41091 472 aaKnown RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 TSPO2Q5TGU0 170 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 MEX3BQ6ZN04 569 aaKnown RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 Q6ZSR3 168 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 TMEM156Q8N614 296 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 ZNF775Q96BV0 537 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 BSCL2Q96G97 398 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 C18orf12Q96KH6 178 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 PUS1Q9Y606 427 aaKnown RBP eCLIP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 RTTNQ86VV8 2226 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 OR2C1O95371 312 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 OR2B8PP59922 312 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 HIST1H3AP68431 136 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 HGFACQ04756 655 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 HIST2H3PS2Q5TEC6 136 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 FOXL2NBQ6ZUU3 175 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 OSR2Q8N2R0 312 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 OR14L1PQ8NHC6 308 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 SLC25A31Q9H0C2 315 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 ZNF700Q9H0M5 742 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 ADAMTS9Q9P2N4 1935 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 BTBD17A6NE02 478 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 C1QL1O75973 258 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 ARG1P05089 322 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 GLI4P10075 376 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 FHITP49789 147 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 UCP3P55916 312 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 RAB2AP61019 212 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 FAM185AQ8N0U4 392 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 OR2G3Q8NGZ4 309 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 ZNF385AQ96PM9 386 aaKnown RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 ZNF442Q9H7R0 627 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 FAM86C1Q9NVL1 165 aa9.37□□□□□ -0.91
CCDC40-207ENST00000572253 UBE2J1Q9Y385 318 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-207ENST00000572253 LINC00587B1AMM8 73 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 BCAT2O15382 392 aaPredicted RBP9.36□□□□□ -0.91
CCDC40-207ENST00000572253 MRPS34P82930 218 aaKnown RBP9.36□□□□□ -0.91
CCDC40-207ENST00000572253 SLC25A45Q8N413 288 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 NAXEQ8NCW5 288 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 MOB3AQ96BX8 217 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 MALSU1Q96EH3 234 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 OR51M1Q9H341 326 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 TMPRSS5Q9H3S3 457 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 GSN-AS1Q9NRJ2 163 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 EXPH5Q8NEV8 1989 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 IGHV3-15A0A0B4J1V0 119 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 A0A1B0GW64 132 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 A0A1W2PPE2 198 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 NRASP01111 189 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 SRFP11831 508 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 EWSR1Q01844 656 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC40-207ENST00000572253 NHLH2Q02577 135 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 SNAI3Q3KNW1 292 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 PHYHD1Q5SRE7 291 aa9.36□□□□□ -0.91
CCDC40-207ENST00000572253 FAM27BQ5VT28 67 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms