RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 TMEM225BP0DP42 221 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 MAPK3P27361 379 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-205ENST00000571028 BDKRB2P30411 391 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 SNU13P55769 128 aaKnown RBP11.08□□□□□ -0.64
CCDC40-205ENST00000571028 LMO4P61968 165 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 GPR50Q13585 617 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 DDI2Q5TDH0 399 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 MUC20Q8N307 709 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-205ENST00000571028 SPICQ8N5J4 248 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 DNAAF1Q8NEP3 725 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 OR52N4Q8NGI2 321 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 TMIGD2Q96BF3 282 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 DUX5Q96PT3 197 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 FAM192AQ9GZU8 254 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 ELL3Q9HB65 397 aaPredicted RBP11.08□□□□□ -0.64
CCDC40-205ENST00000571028 TCF7L1Q9HCS4 588 aa11.08□□□□□ -0.64
CCDC40-205ENST00000571028 TRAV38-1A0A0B4J264 116 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 MAGEA13PA6NCF6 341 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 CEACAM18A8MTB9 384 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 SRRM5B3KS81 715 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 ADAM20O43506 726 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 NXPH2O95156 264 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 LHBP01229 141 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 RPS2P15880 293 aaKnown RBP11.07□□□□□ -0.64
CCDC40-205ENST00000571028 PRTN3P24158 256 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 GABRA2P47869 451 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 FABP5Q01469 135 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 IL24Q13007 206 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 MICBQ29980 383 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 ZNF404Q494X3 552 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 TMEM155Q4W5P6 130 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 UNQ9370/PRO34162Q6UXP9 181 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 FAM90A1Q86YD7 464 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 JAGN1Q8N5M9 183 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 SIGLECL1Q8N7X8 197 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 POC1AQ8NBT0 407 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 OR10Z1Q8NGY1 313 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 TNFAIP8L1Q8WVP5 186 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 CCL13Q99616 98 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 PKIBQ9C010 78 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 VCX3AQ9NNX9 186 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 EXOSC4Q9NPD3 245 aaKnown RBP11.07□□□□□ -0.64
CCDC40-205ENST00000571028 TMEM138Q9NPI0 162 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 ING4Q9UNL4 249 aa11.07□□□□□ -0.64
CCDC40-205ENST00000571028 SF3B6Q9Y3B4 125 aaKnown RBP11.07□□□□□ -0.64
CCDC40-205ENST00000571028 TRAPPC2LH3BP13 241 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-205ENST00000571028 CCRL2O00421 344 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 GABRPO00591 440 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 IGHV2-5P01817 119 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 IGFBP3P17936 291 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-205ENST00000571028 BCL3P20749 454 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 GATA3P23771 443 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 GABRA5P31644 462 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 CFHR2P36980 270 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 CEBPDP49716 269 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-205ENST00000571028 SEC61A1P61619 476 aaKnown RBP11.06□□□□□ -0.64
CCDC40-205ENST00000571028 LCN2P80188 198 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 PDZK1IP1Q13113 114 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 TRAM1Q15629 374 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 KISS1Q15726 138 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 HSD17B12Q53GQ0 312 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 TMEM91Q6ZNR0 172 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 MKXQ8IYA7 352 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 SLC25A28Q96A46 364 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 CEP19Q96LK0 163 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 NR1H4Q96RI1 486 aaPredicted RBP11.06□□□□□ -0.64
CCDC40-205ENST00000571028 SLITRK2Q9H156 845 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 PATZ1Q9HBE1 687 aaKnown RBP11.06□□□□□ -0.64
CCDC40-205ENST00000571028 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 NLKQ9UBE8 527 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 OR14J1Q9UGF5 321 aa11.06□□□□□ -0.64
CCDC40-205ENST00000571028 TANC2Q9HCD6 1990 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 A0A1B0GW55 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 F8VVB4 439 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 F8VWA3 439 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 ALX3O95076 343 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L2P0CJ85 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L3P0CJ86 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L4P0CJ87 422 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L5P0CJ88 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L6P0CJ89 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L7P0CJ90 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 PGA5P0DJD9 388 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 FSTP19883 344 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 MPZP25189 248 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 PSMA1P25786 263 aaKnown RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 ZNF93P35789 620 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 OR3A4PP47883 348 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 NPBWR2P48146 333 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 GP2P55259 537 aaKnown RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 BAMBIQ13145 260 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 IKZF1Q13422 519 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 KCNJ8Q15842 424 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 ZNF529Q6P280 563 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DUX4L9Q6RFH8 374 aaPredicted RBP11.05□□□□□ -0.64
CCDC40-205ENST00000571028 ACP7Q6ZNF0 438 aa11.05□□□□□ -0.64
CCDC40-205ENST00000571028 DCDC5Q6ZRR9 648 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms