RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 RPS25P62851 125 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 DEFB103AP81534 67 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 PPP1R8Q12972 351 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 SRSF6Q13247 344 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 CRMP1Q14194 572 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 FZD2Q14332 565 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 MEF2DQ14814 521 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 DCAF4L1Q3SXM0 396 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 C5orf47Q569G3 176 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 TCEAL5Q5H9L2 206 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 CTSL3PQ5NE16 218 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 C1orf220Q5T0J3 134 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 C12orf73Q69YU5 71 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 OR4A47Q6IF82 309 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SFXN4Q6P4A7 337 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 PRSS54Q6PEW0 395 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 TEX38Q6PEX7 206 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 PODNL1Q6PEZ8 512 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 OPN5Q6U736 354 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.41□□□□□ -1.865e-7■■■■□ 21.8
CDC27-211ENST00000570740 S100A7AQ86SG5 101 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 PGBD5Q8N414 524 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 FAM86B1Q8N7N1 296 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 ARIH2OSQ8N7S6 290 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 ACOT4Q8N9L9 421 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 CHST4Q8NCG5 386 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 NOXO1Q8NFA2 376 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 TSTD1Q8NFU3 115 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 OR9K2Q8NGE7 335 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 OR6K2Q8NGY2 324 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 MPLKIPQ8TAP9 179 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SPPL2AQ8TCT8 520 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SFXN5Q8TD22 340 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 ABHD5Q8WTS1 349 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SECTM1Q8WVN6 248 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 GEMIN6Q8WXD5 167 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 PINX1Q96BK5 328 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 ANKRD9Q96BM1 317 aaPredicted RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 ZNF707Q96C28 371 aaPredicted RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 ATXN7L3BQ96GX2 97 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 THOC3Q96J01 351 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 ZNF582Q96NG8 517 aaPredicted RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 IP6K3Q96PC2 410 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SIGLEC12Q96PQ1 595 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 TBX15Q96SF7 602 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 CDX2Q99626 313 aaPredicted RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 NIPSNAP3BQ9BS92 247 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 NICN1Q9BSH3 213 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 FNDC11Q9BVV2 318 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 HINT2Q9BX68 163 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 NMES1Q9C002 83 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 OR52D1Q9H346 318 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 TMEM231Q9H6L2 316 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SAP30LQ9HAJ7 183 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 IL21RQ9HBE5 538 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 BEX1Q9HBH7 125 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 NGBQ9NPG2 151 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 TMEM9BQ9NQ34 198 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 FGF21Q9NSA1 209 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 WRAP73Q9P2S5 460 aaPredicted RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 CLN8Q9UBY8 286 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 RAB22AQ9UL26 194 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 DAPP1Q9UN19 280 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 SCML2Q9UQR0 700 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 RASD1Q9Y272 281 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 LAMTOR2Q9Y2Q5 125 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 MRPS28Q9Y2Q9 187 aaKnown RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 UBE2J1Q9Y385 318 aaPredicted RBP3.41□□□□□ -1.86
CDC27-211ENST00000570740 RHBDD3Q9Y3P4 386 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 ENPP4Q9Y6X5 453 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 NLRC5Q86WI3 1866 aa3.41□□□□□ -1.86
CDC27-211ENST00000570740 LOC100509620A0A075B734 347 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TRAV26-1A0A087WT03 109 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TRAV14DV4A0A0A6YYC5 116 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 BORCS7-ASMTA0A0B4J1R7 106 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TRBV7-9A0A0J9YWB2 115 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 A0A1B0GTI1 187 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 A0A1W2PRS3 328 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TMEM213A2RRL7 107 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TMEM150BA6NC51 233 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 GAGE10A6NGK3 116 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 FBLL1A6NHQ2 334 aaKnown RBP3.4□□□□□ -1.87
CDC27-211ENST00000570740 C17orf105B2RV13 164 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 FAM157AC9JC47 383 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 PIRO00625 290 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 RFXANKO14593 260 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TRANK1O15050 2925 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 FGF17O60258 216 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 LRATO95237 230 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 TSPAN13O95857 204 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 PLAUP00749 431 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 MT-ATP6P00846 226 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 HLA-DQB2P05538 268 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 CTSLP07711 333 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 OR4Q2P0C623 313 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 SEC11BP0C7V7 166 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 AKAIN1P0CW23 69 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 SMIM10L1P0DMW3 83 aa3.4□□□□□ -1.87
CDC27-211ENST00000570740 OR12D1P0DN82 309 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms