RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 PLEKHA6Q9Y2H5 1048 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 PEX16Q9Y5Y5 336 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 FREM1Q5H8C1 2179 aa5.56□□□□□ -1.52
CTDNEP1-204ENST00000570484 A0A075B6Q4 140 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM272A0A1B0GTI8 110 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 OOEPA6NGQ2 149 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 SRRM5B3KS81 715 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RHBDL1O75783 438 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 CLPXO76031 633 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR7C1O76099 320 aaPredicted RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 PAHP00439 452 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 KNG1P01042 644 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 CD8AP01732 235 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 HPXP02790 462 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF44P15621 663 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RAB6AP20340 208 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 GABRR1P24046 479 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 CD80P33681 288 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ART1P52961 327 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RBM11P57052 281 aaKnown RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 FGF12P61328 243 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RPS27AP62979 156 aaKnown RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 MRPS11P82912 194 aaKnown RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 IL13RA2Q14627 380 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF181Q2M3W8 571 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 C2orf76Q3KRA6 126 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM76BQ5HYJ3 339 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 NKAPLQ5M9Q1 402 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 SPANXN2Q5MJ10 180 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM69Q5SWH9 247 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 HIST2H2BCQ6DN03 193 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM166AQ6J272 317 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 CLEC2AQ6UVW9 174 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 BAIAP2L2Q6UXY1 529 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 CDH24Q86UP0 819 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 LRRC28Q86X40 367 aaPredicted RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A1Q86YD7 464 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 LAX1Q8IWV1 398 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM58AQ8N1B3 248 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 MUC20Q8N307 709 aaPredicted RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR56B1Q8NGI3 324 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR51T1Q8NGJ9 327 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RAB40AQ8WXH6 277 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RAB1CQ92928 201 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 MRPS24Q96EL2 167 aaKnown RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 PERPQ96FX8 193 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ZNF488Q96MN9 340 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 NEDD4LQ96PU5 975 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 NRIP2Q9BQI9 281 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 SLIRPQ9GZT3 109 aaKnown RBP5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ATG5Q9H1Y0 275 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 BANF2Q9H503 90 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 CHODLQ9H9P2 273 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 SPACA1Q9HBV2 294 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 DIABLOQ9NR28 239 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 TPSG1Q9NRR2 321 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RASL12Q9NYN1 266 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 TREM2Q9NZC2 230 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 MTCH1Q9NZJ7 389 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 NLKQ9UBE8 527 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR14J1Q9UGF5 321 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 OR5V1Q9UGF6 321 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 RAB22AQ9UL26 194 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ST3GAL6Q9Y274 331 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 A3GALT2U3KPV4 340 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 HIVEP3Q5T1R4 2406 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 ALPK2Q86TB3 2170 aa5.55□□□□□ -1.52
CTDNEP1-204ENST00000570484 MYO7BQ6PIF6 2116 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 HCFC1P51610 2035 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PPIAL4EA0A075B759 164 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 TRAV38-1A0A0B4J264 116 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 IGKV1-12A0A0C4DH73 117 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A10PA6NDY2 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A18PA6NE21 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A16PA6NEW6 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A20PA6NIJ5 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A8PA6NJQ4 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A7PA6NKC0 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A22PA8MWA6 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM14DPA8MWL7 114 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A12PA8MX19 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A5PA8MXJ8 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A23PA8MXZ1 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PPIAL4DF5H284 164 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 TMEM178BH3BS89 294 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 LGALS8O00214 317 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 SH2D1BO14796 132 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 PPIHO43447 177 aaKnown RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 SSX4O60224 188 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 HPGDSO60760 199 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 NOS1APO75052 506 aaPredicted RBP5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 IGKV1D-12P01611 117 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 APOA1P02647 267 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 SFTPBP07988 381 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 H2AFB1P0C5Y9 115 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 H2AFB2P0C5Z0 115 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A15PP0C7V4 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A13PP0C7W8 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A14PP0C7W9 464 aa5.54□□□□□ -1.52
CTDNEP1-204ENST00000570484 FAM90A24PP0C7X0 464 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms