RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 S100A16Q96FQ6 103 aaKnown RBP13□□□□□ -0.33
HERPUD1-219ENST00000570273 Q96M66 194 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 CCL19Q99731 98 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 NICN1Q9BSH3 213 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 LPAR5Q9H1C0 372 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 RHOFQ9HBH0 211 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 UNC79Q9P2D8 2635 aa13□□□□□ -0.33
HERPUD1-219ENST00000570273 IGHV1-69-2A0A0G2JMI3 117 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 SRRM5B3KS81 715 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 ACAA1P09110 424 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 GLRA1P23415 457 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 GABRR1P24046 479 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 CD80P33681 288 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 CFHR2P36980 270 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 RBMXP38159 391 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 HOXA4Q00056 320 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 SMIM21Q3B7S5 101 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 SPANXN2Q5MJ10 180 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 BIVMQ86UB2 503 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 IZUMO1Q8IYV9 350 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 Q8NFD4 153 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 NEU4Q8WWR8 484 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 TM2D1Q9BX74 207 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 HMG20AQ9NP66 347 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 IL36RNQ9UBH0 155 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 ST3GAL6Q9Y274 331 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 CACNG2Q9Y698 323 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 HRNRQ86YZ3 2850 aaPredicted RBP12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 CENPEQ02224 2701 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 ARFGEF3Q5TH69 2177 aa12.99□□□□□ -0.33
HERPUD1-219ENST00000570273 A0A0A6YYD4 124 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 IFNL4K9M1U5 179 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 SCGNO76038 276 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 CDK2P24941 298 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 PITPNBP48739 271 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 VEGFCP49767 419 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 TAF9Q16594 264 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 TMEM69Q5SWH9 247 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 FAM131AQ6UXB0 335 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 TGIF2LYQ8IUE0 185 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 MFSD4AQ8N468 514 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 OR56B1Q8NGI3 324 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 S100ZQ8WXG8 99 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 WDR13Q9H1Z4 485 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 HES4Q9HCC6 221 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 AKIP1Q9NQ31 210 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 DIABLOQ9NR28 239 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 DCAF16Q9NXF7 216 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 NPTNQ9Y639 398 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 CACNA1DQ01668 2161 aa12.98□□□□□ -0.33
HERPUD1-219ENST00000570273 GEMIN2O14893 280 aaKnown RBP12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 IL13RA2Q14627 380 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 ZNF181Q2M3W8 571 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 MOGAT2Q3SYC2 334 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 NHLRC3Q5JS37 347 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 HIST2H2BCQ6DN03 193 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 RAB12Q6IQ22 244 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 BAIAP2L2Q6UXY1 529 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 ACP7Q6ZNF0 438 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 C1orf87Q8N0U7 546 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 CHST4Q8NCG5 386 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 CCL17Q92583 94 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 SEH1LQ96EE3 360 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 CXorf56Q9H5V9 222 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 TMEM106BQ9NUM4 274 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 RASL12Q9NYN1 266 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 DNAJB11Q9UBS4 358 aa12.97□□□□□ -0.33
HERPUD1-219ENST00000570273 A0A0A6YYH2 397 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 FABP12A6NFH5 140 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 A6NJ64 397 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 OVOL3O00110 214 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 SOCS1O15524 211 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 XRCC3O43542 346 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 CHRM2P08172 466 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 DUSP1P28562 367 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 ETV6P41212 452 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 TAS2R20P59543 309 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 IKZF1Q13422 519 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 IL18Q14116 193 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 HFEQ30201 348 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 NKAPLQ5M9Q1 402 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 FAM201AQ5SY85 155 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 ZNF787Q6DD87 383 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 LINC00596Q86U02 117 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 OR10R2Q8NGX6 335 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 IGFBPL1Q8WX77 278 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 RDH5Q92781 318 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 OR14J1Q9UGF5 321 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 MRPS7Q9Y2R9 242 aaKnown RBP12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 V9GYH0 126 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 FBN2P35556 2912 aa12.96□□□□□ -0.33
HERPUD1-219ENST00000570273 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 IGHV3OR15-7A0A075B7D8 119 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A10PA6NDY2 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A18PA6NE21 464 aa12.96□□□□□ -0.34
HERPUD1-219ENST00000570273 FAM90A16PA6NEW6 464 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms