RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 F8VVB4 439 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 F8VWA3 439 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 TIMM23O14925 209 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 ANGPTL7O43827 346 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 MT-ND2P03891 347 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 CEBPDP49716 269 aaPredicted RBP13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 RBP2P50120 134 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 ACTA2P62736 377 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 ACTG2P63267 376 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 PRB3Q04118 309 aaPredicted RBP13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 MEF2CQ06413 473 aaPredicted RBP13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 ZNF273Q14593 569 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 BRICD5Q6PL45 260 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 CRIP3Q6Q6R5 217 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 LIAT1Q6ZQX7 453 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 CCDC121Q6ZUS5 278 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 ENTHD1Q8IYW4 607 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 OR8H2Q8N162 312 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 ACBD7Q8N6N7 88 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 TRMT10AQ8TBZ6 339 aaKnown RBP13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 SPSB1Q96BD6 273 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 RNFT2Q96EX2 444 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 FRRS1LQ9P0K9 344 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 FBLN5Q9UBX5 448 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 OR14J1Q9UGF5 321 aa13.9□□□□□ -0.18
MAP1LC3B-208ENST00000570189 IGKV1-9A0A0C4DH69 117 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 TRBV2A0A0J9YWF9 115 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 DAPL1A0PJW8 107 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 VGLL3A8MV65 326 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MPZL2O60487 215 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PRKACBP22694 351 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ATP1B3P54709 279 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 NANOS3P60323 173 aaKnown RBP13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 KRTAP10-3P60369 221 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 COL10A1Q03692 680 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF146Q15072 292 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LRRC75BQ2VPJ9 315 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SPIN3Q5JUX0 258 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SLC25A26Q70HW3 274 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SYS1Q8N2H4 156 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 CBR4Q8N4T8 237 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ADAT3Q96EY9 351 aaPredicted RBP13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PELI1Q96FA3 418 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MRPL48Q96GC5 212 aaKnown RBP13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SNX22Q96L94 193 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 C9orf16Q9BUW7 83 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RHOFQ9HBH0 211 aa13.89□□□□□ -0.19
MAP1LC3B-208ENST00000570189 A0A1W2PRD5 423 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 A0A1W2PRF3 423 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 A0A1W2PRM7 423 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ODF3BA8MYP8 253 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 M0QZ24 198 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ALX3O95076 343 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 IGHA1P01876 353 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 HTR1AP08908 422 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 CCL3L1P16619 93 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OR12D2P58182 307 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SRSF4Q08170 494 aaKnown RBP13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MRPL28Q13084 256 aaKnown RBP13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 C11orf88Q6PI97 169 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LHFPL2Q6ZUX7 228 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RDH10Q8IZV5 341 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OR11H6Q8NGC7 330 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OR4M1Q8NGD0 313 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RHOXF1Q8NHV9 184 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 C17orf50Q8WW18 174 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SSX3Q99909 188 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 CDCA4Q9BXL8 241 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RANBP3Q9H6Z4 567 aaPredicted RBP13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RAB18Q9NP72 206 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 INPP5EQ9NRR6 644 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 HHLA2Q9UM44 414 aa13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 TBL2Q9Y4P3 447 aaKnown RBP13.88□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OR4C45A6NMZ5 311 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 H3BUX3 64 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF728P0DKX0 622 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ATF1P18846 271 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 AZGP1P25311 298 aaKnown RBP13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 GALEQ14376 348 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ASPHD2Q6ICH7 369 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 GDPD3Q7L5L3 318 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 DTX3Q8N9I9 347 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ASCC1Q8N9N2 400 aaKnown RBP13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 HAVCR2Q8TDQ0 301 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SLAMF9Q96A28 289 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LGALS12Q96DT0 336 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 Q96MT0 163 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF649Q9BS31 505 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MMP27Q9H306 513 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MRPS18AQ9NVS2 196 aaKnown RBP13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 GMPPBQ9Y5P6 360 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LINC00312Q9Y6C7 94 aa13.87□□□□□ -0.19
MAP1LC3B-208ENST00000570189 TMEM82A0PJX8 343 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 WIPF1O43516 503 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 HAND1O96004 215 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 CYB5AP00167 134 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 DBTP11182 482 aaKnown RBP13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ERP29P30040 261 aaKnown RBP13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 KIR2DS4P43632 304 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms