RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 CCDC32Q9BV29 185 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 SELENOIQ9C0D9 397 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 SLC22A4Q9H015 551 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 CXXC4Q9H2H0 198 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 NOP16Q9Y3C1 178 aaKnown RBP8.47□□□□□ -1.05
GDE1-205ENST00000569899 A0A1W2PQ09 198 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 PLSCR5A0PG75 271 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 LRP5LA4QPB2 252 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 TMEM210A6NLX4 147 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 F8VVB4 439 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 F8VWA3 439 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 RAB27BO00194 218 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 XRCC3O43542 346 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 RHBDL1O75783 438 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 HLA-DQB1P01920 261 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 CSTBP04080 98 aaKnown RBP8.47□□□□□ -1.05
GDE1-205ENST00000569899 GRPP07492 148 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 IL7P13232 177 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 MPZP25189 248 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 RANBP1P43487 201 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 KIR2DL3P43628 341 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 MAB21L1Q13394 359 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 STEAP3Q658P3 488 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 Q8N402 240 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 ZSCAN4Q8NAM6 433 aaPredicted RBP8.47□□□□□ -1.05
GDE1-205ENST00000569899 SCCPDHQ8NBX0 429 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 AQP3Q92482 292 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 PHF21AQ96BD5 680 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 ELMOD3Q96FG2 381 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 PKIBQ9C010 78 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 PLK3Q9H4B4 646 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 PALMDQ9NP74 551 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 DIABLOQ9NR28 239 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 RBFOX1Q9NWB1 397 aaKnown RBP8.47□□□□□ -1.05
GDE1-205ENST00000569899 IL36GQ9NZH8 169 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 MTCH1Q9NZJ7 389 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 ZNF581Q9P0T4 197 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 IL36RNQ9UBH0 155 aa8.47□□□□□ -1.05
GDE1-205ENST00000569899 RAI1Q7Z5J4 1906 aaPredicted RBP8.47□□□□□ -1.05
GDE1-205ENST00000569899 DOPEY1Q5JWR5 2465 aa8.46□□□□□ -1.05
GDE1-205ENST00000569899 USP9XQ93008 2570 aaPredicted RBP8.46□□□□□ -1.05
GDE1-205ENST00000569899 TRAV18A0A075B6X5 111 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 TRAV20A0A0B4J274 112 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 METTL21EPA6NDL7 271 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 SOCS1O15524 211 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 SPRY3O43610 288 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 IGFBP2P18065 325 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 RBMXP38159 391 aaKnown RBP8.46□□□□□ -1.06
GDE1-205ENST00000569899 MNDAP41218 407 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 SNU13P55769 128 aaKnown RBP8.46□□□□□ -1.06
GDE1-205ENST00000569899 SELENOVP59797 346 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 IL24Q13007 206 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 MPPED2Q15777 294 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 PIGYQ3MUY2 71 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 SPRNQ5BIV9 151 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 FAM76BQ5HYJ3 339 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 LYSMD2Q8IV50 215 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 SAXO1Q8IYX7 474 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 FBXL14Q8N1E6 418 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 OR51T1Q8NGJ9 327 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 LILRB1Q8NHL6 650 aaPredicted RBP8.46□□□□□ -1.06
GDE1-205ENST00000569899 TRIM63Q969Q1 353 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 TMEM204Q9BSN7 226 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 URM1Q9BTM9 101 aaKnown RBP8.46□□□□□ -1.06
GDE1-205ENST00000569899 TM2D1Q9BX74 207 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 ZMAT3Q9HA38 289 aaKnown RBP8.46□□□□□ -1.06
GDE1-205ENST00000569899 UFSP2Q9NUQ7 469 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 NKIRAS2Q9NYR9 191 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 ELF5Q9UKW6 265 aaPredicted RBP8.46□□□□□ -1.06
GDE1-205ENST00000569899 ABCA4P78363 2273 aa8.46□□□□□ -1.06
GDE1-205ENST00000569899 HRNRQ86YZ3 2850 aaPredicted RBP8.45□□□□□ -1.06
GDE1-205ENST00000569899 DYSFO75923 2080 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 FLNCQ14315 2725 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 A0A0A6YYH2 397 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 MEIOCA2RUB1 952 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 TMEM235A6NFC5 223 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 A6NJ64 397 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 A6NLC8 198 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 TRAPPC2LH3BP13 241 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 CDIPTO14735 213 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 LANCL1O43813 399 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 ZNF780AO75290 641 aaPredicted RBP8.45□□□□□ -1.06
GDE1-205ENST00000569899 CYB5AP00167 134 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 IGHV1-46P01743 117 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 CD3GP09693 182 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 GTF2F2P13984 249 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 CPT2P23786 658 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 GABRR1P24046 479 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 CD200P41217 278 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 ZNF81P51508 661 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 RBM11P57052 281 aaKnown RBP8.45□□□□□ -1.06
GDE1-205ENST00000569899 HOXA4Q00056 320 aaPredicted RBP8.45□□□□□ -1.06
GDE1-205ENST00000569899 PITPNAQ00169 270 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 SRSF1Q07955 248 aaKnown RBP eCLIP8.45□□□□□ -1.06
GDE1-205ENST00000569899 GPR176Q14439 515 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 DAZAP2Q15038 168 aaPredicted RBP8.45□□□□□ -1.06
GDE1-205ENST00000569899 ZNF181Q2M3W8 571 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 RAB12Q6IQ22 244 aa8.45□□□□□ -1.06
GDE1-205ENST00000569899 ZNF826PQ6ZT77 177 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms