RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 C6orf15Q6UXA7 325 aaPredicted RBP7.63□□□□□ -1.19
LINC00558-201ENST00000569422 ETV3LQ6ZN32 361 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 KCNRGQ8N5I3 272 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 OR51F2Q8NH61 342 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 HAS2Q92819 552 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 WNT2BQ93097 391 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 BORCS8Q96FH0 119 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 OR10C1Q96KK4 312 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 FOXB1Q99853 325 aa7.63□□□□□ -1.19
LINC00558-201ENST00000569422 LOC400499M0QZD8 3231 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 LOC102725191A0A1B0GVB3 256 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 GJE1A6NN92 205 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 BCL2L11O43521 198 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 IL2RAP01589 272 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 CRHP06850 196 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 UBBP0CG47 229 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 CPT2P23786 658 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 RAB4BP61018 213 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 UBA52P62987 128 aaKnown RBP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 PSG4Q00888 419 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 C3AR1Q16581 482 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 FAM27BQ5VT28 67 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 AADACL3Q5VUY0 350 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 LPCAT3Q6P1A2 487 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 TRAT1Q6PIZ9 186 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 MOB3CQ70IA8 216 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 OR1F12Q8NHA8 337 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 RTBDNQ9BSG5 229 aaPredicted RBP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 CALHM2Q9HA72 323 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 OR5AC2Q9NZP5 309 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 R4GN57 208 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 IGKV1-27A0A075B6S5 117 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 MSGN1A6NI15 193 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 C3orf80F5H4A9 247 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 H0YIZ8 118 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 HSPB6O14558 160 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 GEMIN2O14893 280 aaKnown RBP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 OR2F2O95006 317 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 HPP00738 406 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 IGHEP01854 428 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 PRF1P14222 555 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 RAB4AP20338 218 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 ITGA3P26006 1051 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 SRD5A2P31213 254 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 HOXA1P49639 335 aaPredicted RBP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 B3GALT5-AS1P59052 145 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 SUPT4H1P63272 117 aaKnown RBP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 RIPPLY1Q0D2K3 151 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 TRA2AQ13595 282 aaKnown RBP eCLIP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 OR2F1Q13607 317 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 RAB32Q13637 225 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 TSPO2Q5TGU0 170 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 CLEC9AQ6UXN8 241 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 C5orf24Q7Z6I8 188 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 GGNQ86UU5 652 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 VASH2Q86V25 355 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 SKA3Q8IX90 412 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 BVESQ8NE79 360 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 TMED6Q8WW62 240 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 PP6455Q8WZ26 134 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 RRNAD1Q96FB5 475 aaKnown RBP7.62□□□□□ -1.19
LINC00558-201ENST00000569422 V9GYS6 101 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 EXPH5Q8NEV8 1989 aa7.62□□□□□ -1.19
LINC00558-201ENST00000569422 LRRC3CA6NJW4 275 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 C22orf46C9J442 243 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SFT2D2O95562 160 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 LIPFP07098 398 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 CYC1P08574 325 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 MRPS34P82930 218 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF92Q03936 586 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SNTB1Q13884 538 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 PLCXD3Q63HM9 321 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ATRAIDQ6UW56 229 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ARRDC1Q8N5I2 433 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 OR5AP2Q8NGF4 316 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 OR2V1Q8NHB1 315 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 PRRG4Q9BZD6 226 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 METTL9Q9H1A3 318 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SLC6A15Q9H2J7 730 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SH2D2AQ9NP31 389 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 MYOZ1Q9NP98 299 aaPredicted RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 TMEM38BQ9NVV0 291 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 C14orf166Q9Y224 244 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 NRASP01111 189 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZP3P21754 424 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 EIF2S3P41091 472 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 CDKN1BP46527 198 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 FOXG1P55316 489 aaPredicted RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 TAS2R31P59538 309 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZXDAP98168 799 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZNF585AQ6P3V2 769 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 FBXL14Q8N1E6 418 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 ZSCAN4Q8NAM6 433 aaPredicted RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 OR52H1Q8NGJ2 320 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 MARVELD3Q96A59 401 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SIGLEC12Q96PQ1 595 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 CMSS1Q9BQ75 279 aaKnown RBP7.61□□□□□ -1.19
LINC00558-201ENST00000569422 OCSTAMPQ9BR26 566 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 SMIM3Q9BZL3 60 aa7.61□□□□□ -1.19
LINC00558-201ENST00000569422 FOXJ2Q9P0K8 574 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms