RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 EDN3P14138 238 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 DMRTA1Q5VZB9 504 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 IGLV3-16A0A075B6K0 115 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A10PA6NDY2 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A18PA6NE21 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A16PA6NEW6 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A20PA6NIJ5 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A8PA6NJQ4 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A7PA6NKC0 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A22PA8MWA6 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A12PA8MX19 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A5PA8MXJ8 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A23PA8MXZ1 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 BMPR1BO00238 502 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 MOSPD3O75425 235 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 KBTBD11O94819 623 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 NKX2-2O95096 273 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A15PP0C7V4 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A13PP0C7W8 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A14PP0C7W9 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 FAM90A24PP0C7X0 464 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 CEBPDP49716 269 aaPredicted RBP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 RPS11P62280 158 aaKnown RBP eCLIP6.35□□□□□ -1.39
CNOT1-216ENST00000569240 CYP2G1PQ6ZSU1 146 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 POM121L2Q96KW2 1035 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 OXGR1Q96P68 337 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 SFXN3Q9BWM7 321 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 SLCO1C1Q9NYB5 712 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 MARCH11A6NNE9 402 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 MKRN2OSH3BPM6 223 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 LINC01387J3KSC0 135 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 HOXB2P14652 356 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 AAED1Q7RTV5 226 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 C16orf82Q7Z2V1 217 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 NUDT10Q8NFP7 164 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 PERPQ96FX8 193 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 SIGMAR1Q99720 223 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 APOOQ9BUR5 198 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 HIF1ANQ9NWT6 349 aa6.35□□□□□ -1.39
CNOT1-216ENST00000569240 N4BP2Q86UW6 1770 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 SNURFLB1AK76 121 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 M0R135 149 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CD79AP11912 226 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 LAIR1Q6GTX8 287 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF799Q96GE5 643 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 NXF5Q9H1B4 397 aaKnown RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 SLC2A10O95528 541 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 HPRT1P00492 218 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CA3P07451 260 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 ATP6V0CP27449 155 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 GUCA2AQ02747 115 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 EXOSC7Q15024 291 aaKnown RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 MRGPREQ86SM8 312 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 MEX3DQ86XN8 651 aaKnown RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 MORN4Q8NDC4 146 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CA10Q9NS85 328 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 WTIPA6NIX2 430 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 OR4C45A6NMZ5 311 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 IL2RAP01589 272 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 RGRP47804 291 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 SKP2Q13309 424 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 SMAD2Q15796 467 aaKnown RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 ZNF766Q5HY98 468 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 WDR38Q5JTN6 314 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 UNQ9370/PRO34162Q6UXP9 181 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 OR5D18Q8NGL1 313 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 OR51E1Q8TCB6 317 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 OR6C3Q9NZP0 311 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 TRBV24-1A0A075B6N3 115 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 SDCBPO00560 298 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CST7O76096 145 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 ACTL6AO96019 429 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 IGLV3-27P01718 113 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 ADRA2AP08913 450 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CD70P32970 193 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 FAM27D1Q5T7N8 215 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 METRNLQ641Q3 311 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 OR11H4Q8NGC9 324 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 GINS3Q9BRX5 216 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 BOKQ9UMX3 212 aaPredicted RBP6.34□□□□□ -1.39
CNOT1-216ENST00000569240 UBE2L5PA0A1B0GUS4 154 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 A8MWL6 223 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 H0YGG7 62 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 EDIL3O43854 480 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 COX7A2P2O60397 106 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CDC14BO60729 498 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 MPZP25189 248 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CD226Q15762 336 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 C1orf100Q5SVJ3 147 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 TMEM136Q6ZRR5 245 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 MED25Q71SY5 747 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 OR2M7Q8NG81 312 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 SGMS2Q8NHU3 365 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 C5orf30Q96GV9 206 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 RHOVQ96L33 236 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 CBLN4Q9NTU7 201 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 GPR132Q9UNW8 380 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 LAMTOR2Q9Y2Q5 125 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 MAST2Q6P0Q8 1798 aa6.34□□□□□ -1.39
CNOT1-216ENST00000569240 A0A1B0GW15 77 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms