RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 SNX22Q96L94 193 aa12.61□□□□□ -0.39
HERPUD1-215ENST00000568676 CLEC7AQ9BXN2 247 aa12.61□□□□□ -0.39
HERPUD1-215ENST00000568676 ZNF556Q9HAH1 456 aa12.61□□□□□ -0.39
HERPUD1-215ENST00000568676 V9GYS6 101 aa12.61□□□□□ -0.39
HERPUD1-215ENST00000568676 TTRP02766 147 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 VSIG8P0DPA2 414 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 OSMP13725 252 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 HOXB6P17509 224 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 ESRRGP62508 458 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 TCTEX1D4Q5JR98 221 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 SLX4IPQ5VYV7 408 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 OR52W1Q6IF63 320 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 Q6ZSR3 168 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 ENTHD1Q8IYW4 607 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 OR51D1Q8NGF3 324 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 MNTQ99583 582 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 MCRIP2Q9BUT9 160 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 TMEM133Q9H2Q1 129 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 INPP5EQ9NRR6 644 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 GPR173Q9NS66 373 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 SLC7A11Q9UPY5 501 aa12.6□□□□□ -0.39
HERPUD1-215ENST00000568676 WI2-2373I1.2A0A1W2PRP0 233 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 LOC110117498-PIK3R3F6TDL0 507 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 M0QZK8 103 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 PSMD9O00233 223 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 CST1P01037 141 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 PEX2P28328 305 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 SLC6A1P30531 599 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 KRTAP10-11P60412 298 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 APOFQ13790 326 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 TRIM25Q14258 630 aaKnown RBP12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 RTN4RL2Q86UN3 420 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 Q8IYB0 196 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 ELMOD2Q8IZ81 293 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 ZNF596Q8TC21 504 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 STMN2Q93045 179 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 CREB3L1Q96BA8 519 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 CEP19Q96LK0 163 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 TAS2R1Q9NYW7 299 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 DPM3Q9P2X0 92 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 IKZF2Q9UKS7 526 aa12.59□□□□□ -0.39
HERPUD1-215ENST00000568676 DCTN3O75935 186 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 OR2F2O95006 317 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 HCCSP53701 268 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 BCL2L15Q5TBC7 163 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 LINC00482Q8N8I6 264 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 BBS1Q8NFJ9 593 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 OR4P4Q8NGL7 312 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 OR14K1Q8NGZ2 314 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 SLC25A19Q9HC21 320 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 GLS2Q9UI32 602 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 UBE2J1Q9Y385 318 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 R4GMQ9 66 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 TENM3Q9P273 2699 aa12.58□□□□□ -0.4
HERPUD1-215ENST00000568676 GNGT2O14610 69 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 SRSF10O75494 262 aaKnown RBP12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 NHLRC4P0CG21 123 aaPredicted RBP12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 ANXA8P13928 327 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 ERP29P30040 261 aaKnown RBP12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 CEACAM3P40198 252 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 BDH1Q02338 343 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 MFGE8Q08431 387 aaPredicted RBP12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 ABCA11PQ4W5N1 156 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 TCF23Q7RTU1 214 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 ANGPTL5Q86XS5 388 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 CCDC54Q8NEL0 328 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 RBM14Q96PK6 669 aaKnown RBP12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 SLC25A33Q9BSK2 321 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 FAM107BQ9H098 131 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 PLEKHA1Q9HB21 404 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 OR52A1Q9UKL2 312 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 GTF2A1LQ9UNN4 478 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 PCDHGB5Q9Y5G0 923 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 SNX5Q9Y5X3 404 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 COL7A1Q02388 2944 aa12.57□□□□□ -0.4
HERPUD1-215ENST00000568676 A0A1B0GTI1 187 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 LEUTXA8MZ59 168 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 MGST3O14880 152 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 GATBO75879 557 aaKnown RBP12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 LPLP06858 475 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 CCL1P22362 96 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 FUT6P51993 359 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 GNGT1P63211 74 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 EDDM3AQ14507 147 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 GRK1Q15835 563 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 SNAPC1Q16533 368 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 KHDC1LQ5JSQ8 128 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 ZNF322Q6U7Q0 402 aaPredicted RBP12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 UNQ9370/PRO34162Q6UXP9 181 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 EGFL6Q8IUX8 553 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 BATF2Q8N1L9 274 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 OSR2Q8N2R0 312 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 DNAJC9Q8WXX5 260 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 LRGUKQ96M69 825 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 CNN2Q99439 309 aaKnown RBP12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 CHID1Q9BWS9 393 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 PRRG3Q9BZD7 231 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 GAL3ST2Q9H3Q3 398 aa12.56□□□□□ -0.4
HERPUD1-215ENST00000568676 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms