RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ZNF43P17038 809 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ZP3P21754 424 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CD34P28906 385 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF93P35789 620 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF133P52736 654 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 FBXW4P57775 412 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 RPS15P62841 145 aaKnown RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 EIF5AP63241 154 aaKnown RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CSNK2A1P68400 391 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MFGE8Q08431 387 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MYBPHQ13203 477 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MELKQ14680 651 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 SURF2Q15527 256 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 TAF13Q15543 124 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 PLPPR5Q32ZL2 321 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 TMEM255AQ5JRV8 349 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 C1orf189Q5VU69 101 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 SIGIRRQ6IA17 410 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MTFR2Q6P444 385 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 OPN5Q6U736 354 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 TMUB2Q71RG4 321 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CHMP1BQ7LBR1 199 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 HSD17B13Q7Z5P4 300 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 SLC25A42Q86VD7 318 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 TMEM17Q86X19 198 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MCEMP1Q8IX19 187 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 PDZD9Q8IXQ8 264 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CCDC36Q8IYA8 594 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 BEST3Q8N1M1 668 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MUC20Q8N307 709 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 GTPBP8Q8N3Z3 284 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 BPIFB2Q8N4F0 458 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 FADS6Q8N9I5 356 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 STEAP2Q8NFT2 490 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 OR4K17Q8NGC6 315 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 OR56B1Q8NGI3 324 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 OR10AC1Q8NH08 325 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MPLKIPQ8TAP9 179 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 WIPF2Q8TF74 440 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MITD1Q8WV92 249 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 C11orf40Q8WZ69 217 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 RBPMSQ93062 196 aaKnown RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF845Q96IR2 970 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 WDR77Q9BQA1 342 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 SEC22CQ9BRL7 303 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 NAA11Q9BSU3 229 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 DEFB126Q9BYW3 111 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ULBP3Q9BZM4 244 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CHIAQ9BZP6 476 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 OR11A1Q9GZK7 315 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 PBOV1Q9GZY1 135 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 MFFQ9GZY8 342 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ARL6Q9H0F7 186 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 PPA2Q9H2U2 334 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 BEX1Q9HBH7 125 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 IFT46Q9NQC8 304 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 SLC22A11Q9NSA0 550 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 CENPMQ9NSP4 180 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 RDH8Q9NYR8 311 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 B3GAT1Q9P2W7 334 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ERRFI1Q9UJM3 462 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF391Q9UJN7 358 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 POLR1DQ9Y2S0 133 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 UBE2J1Q9Y385 318 aaPredicted RBP4.58□□□□□ -1.68
CAPN3-217ENST00000567817 NUP210LQ5VU65 1888 aa4.58□□□□□ -1.68
CAPN3-217ENST00000567817 A0A0U1RQV5 110 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 A0A1B0GTH9 108 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 A0A1W2PQM1 296 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 OR5H14A6NHG9 310 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 SERPINE3A8MV23 424 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 TMEM14DPA8MWL7 114 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 B4E171 279 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 C9J4A7 227 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 RAD1O60671 282 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 MPC2O95563 127 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 DUS4LO95620 317 aaKnown RBP4.57□□□□□ -1.68
CAPN3-217ENST00000567817 WDPCPO95876 746 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 HLA-AP01891 365 aaKnown RBP4.57□□□□□ -1.68
CAPN3-217ENST00000567817 TTRP02766 147 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 KLK3P07288 261 aaPredicted RBP4.57□□□□□ -1.68
CAPN3-217ENST00000567817 PET100P0DJ07 73 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF35P13682 527 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 CXCL2P19875 107 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 TCN2P20062 427 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 TSPAN7P41732 249 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 RPS27P42677 84 aaKnown RBP4.57□□□□□ -1.68
CAPN3-217ENST00000567817 ALDH3B1P43353 468 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 MAGEB1P43366 347 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 CX3CR1P49238 355 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 ZNF84P51523 738 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 PRKXP51817 358 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 EFNB2P52799 333 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 BIDP55957 195 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 H2BFSP57053 126 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 TAS2R46P59540 309 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 QRFPP83859 136 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 SPOCK1Q08629 439 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 ECH1Q13011 328 aa4.57□□□□□ -1.68
CAPN3-217ENST00000567817 DHRS2Q13268 280 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms