RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 CD177Q8N6Q3 437 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 ST8SIA4Q92187 359 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 EMG1Q92979 244 aaKnown RBP14.28□□□□□ -0.12
COMMD4-220ENST00000567720 SHARPINQ9H0F6 387 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 NEK6Q9HC98 313 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 ISYNA1Q9NPH2 558 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 METRNQ9UJH8 293 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 INSIG2Q9Y5U4 225 aa14.28□□□□□ -0.12
COMMD4-220ENST00000567720 RFPL4AA6NLU0 287 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 RFPL4AL1F8VTS6 287 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 MRPS14O60783 128 aaKnown RBP14.27□□□□□ -0.13
COMMD4-220ENST00000567720 SC5DO75845 299 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 KNG1P01042 644 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 GATA3P23771 443 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 GABRA2P47869 451 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 RPS25P62851 125 aaKnown RBP14.27□□□□□ -0.13
COMMD4-220ENST00000567720 IL13RA1P78552 427 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 EMX1Q04741 257 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-220ENST00000567720 TPBGQ13641 420 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 CHRFAM7AQ494W8 412 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 FAM27D1Q5T7N8 215 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 DDI2Q5TDH0 399 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 FAHD2BQ6P2I3 314 aaPredicted RBP14.27□□□□□ -0.13
COMMD4-220ENST00000567720 MKXQ8IYA7 352 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 SDSLQ96GA7 329 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 FAHD2AQ96GK7 314 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 MGLLQ99685 303 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 YTHDF1Q9BYJ9 559 aaKnown RBP14.27□□□□□ -0.13
COMMD4-220ENST00000567720 NOX4Q9NPH5 578 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 LPAR3Q9UBY5 353 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 OPN4Q9UHM6 478 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 MAB21L2Q9Y586 359 aa14.27□□□□□ -0.13
COMMD4-220ENST00000567720 LOC105371242A0A075B767 164 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 J3QLI3 93 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 GPX5O75715 221 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 KDM4BO94953 1096 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 CYB5AP00167 134 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 SFTPBP07988 381 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 CPEP16870 476 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 HNF1AP20823 631 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 MAPK3P27361 379 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-220ENST00000567720 BDKRB2P30411 391 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 OR3A4PP47883 348 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 GPR50Q13585 617 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 KCTD21Q4G0X4 260 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 PHC2Q8IXK0 858 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 Q8IYB0 196 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 SPARTQ8N0X7 666 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 SVOPQ8N4V2 548 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 MS4A15Q8N5U1 240 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 ZNRF1Q8ND25 227 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 THRSPQ92748 146 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 NUDT16L1Q9BRJ7 211 aaKnown RBP14.26□□□□□ -0.13
COMMD4-220ENST00000567720 ELL3Q9HB65 397 aaPredicted RBP14.26□□□□□ -0.13
COMMD4-220ENST00000567720 TMEM138Q9NPI0 162 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 CKLFQ9UBR5 152 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 OR14J1Q9UGF5 321 aa14.26□□□□□ -0.13
COMMD4-220ENST00000567720 NDUFB3O43676 98 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 ENSAO43768 121 aaKnown RBP14.25□□□□□ -0.13
COMMD4-220ENST00000567720 ALDOBP05062 364 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 CALCBP10092 127 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 ADRA2CP18825 462 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 GP2P55259 537 aaKnown RBP14.25□□□□□ -0.13
COMMD4-220ENST00000567720 SSX1Q16384 188 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 ACSM3Q53FZ2 586 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 ZNF773Q6PK81 442 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 BTN2A1Q7KYR7 527 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 C1QL2Q7Z5L3 287 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 SAXO1Q8IYX7 474 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 TMEM185AQ8NFB2 350 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 TNFAIP8L1Q8WVP5 186 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 RAB40AQ8WXH6 277 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 TMEM203Q969S6 136 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 CPNE2Q96FN4 548 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-220ENST00000567720 BEX2Q9BXY8 128 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 FAM192AQ9GZU8 254 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 SLC25A10Q9UBX3 287 aaPredicted RBP14.25□□□□□ -0.13
COMMD4-220ENST00000567720 FOXJ3Q9UPW0 622 aa14.25□□□□□ -0.13
COMMD4-220ENST00000567720 SF3B6Q9Y3B4 125 aaKnown RBP14.25□□□□□ -0.13
COMMD4-220ENST00000567720 MAGEB3O15480 346 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 TMEM225BP0DP42 221 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 PRKACAP17612 351 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 PRDX2P32119 198 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 TGFBR2P37173 567 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 SNU13P55769 128 aaKnown RBP14.24□□□□□ -0.13
COMMD4-220ENST00000567720 RIPPLY3P57055 190 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 LRRC10Q5BKY1 277 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 UBE2UQ5VVX9 321 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 UNQ9370/PRO34162Q6UXP9 181 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 TMEM91Q6ZNR0 172 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 SATL1Q86VE3 508 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 FAM58AQ8N1B3 248 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 ZSCAN4Q8NAM6 433 aaPredicted RBP14.24□□□□□ -0.13
COMMD4-220ENST00000567720 POM121Q96HA1 1249 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 MED30Q96HR3 178 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 GPER1Q99527 375 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 PPIL3Q9H2H8 161 aaKnown RBP14.24□□□□□ -0.13
COMMD4-220ENST00000567720 C7orf69Q9H7B7 122 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 HMG20AQ9NP66 347 aa14.24□□□□□ -0.13
COMMD4-220ENST00000567720 RPUSD1Q9UJJ7 312 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms