RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	DYRK2	Q92630	601 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	TAF15	Q92804	592 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	TNFRSF14	Q92956	283 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	RNFT2	Q96EX2	444 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	MRPL48	Q96GC5	212 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	PKIB	Q9C010	78 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLITRK2	Q9H156	845 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	DPAGT1	Q9H3H5	408 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	ELL3	Q9HB65	397 aa	Predicted RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	BEX1	Q9HBH7	125 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	HES4	Q9HCC6	221 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	RHBDL2	Q9NX52	303 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	PTTG2	Q9NZH5	202 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	FRRS1L	Q9P0K9	344 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	EXOG	Q9Y2C4	368 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	SF3B6	Q9Y3B4	125 aa	Known RBP	5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	GMPPB	Q9Y5P6	360 aa		5.67	□□□□□ -1.5
SF3B3-209	ENST00000567635	IGKV1-27	A0A075B6S5	117 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	LOC107986453	A0A1B0GWG9	222 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	hCG_1809904	A0A1W2PP81	198 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PPE2	198 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PPH5	198 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PR64	198 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		A0A1W2PRV1	198 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		J3QLW9	94 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		K7N7A8	449 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC16A6	O15403	523 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	SPRY1	O43609	319 aa	Predicted RBP	5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	GPR137B	O60478	399 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MPZL2	O60487	215 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	NDUFA7	O95182	113 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	KNG1	P01042	644 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	IGHV4-59	P01825	116 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	TK1	P04183	234 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	ISG15	P05161	165 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	CHRM2	P08172	466 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	HTR1A	P08908	422 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF19	P17023	458 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MDK	P21741	143 aa	Predicted RBP	5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	PRKACB	P22694	351 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	CEBPD	P49716	269 aa	Predicted RBP	5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	CCR9	P51686	369 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	ATP1B3	P54709	279 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	RAG2	P55895	527 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	DLX1	P56177	255 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MTCP1	P56278	107 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR12D2	P58182	307 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	RPL31	P62899	125 aa	Known RBP	5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	PRB3	Q04118	309 aa	Predicted RBP	5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACSM1	Q08AH1	577 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	KLRD1	Q13241	179 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	GALE	Q14376	348 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MIDN	Q504T8	468 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLC25A26	Q70HW3	274 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	UTS2B	Q765I0	119 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	LHFPL3	Q86UP9	236 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	CROCCP3	Q8IVE0	287 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MKX	Q8IYA7	352 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	BATF2	Q8N1L9	274 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	DHRSX	Q8N5I4	330 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	DNAAF1	Q8NEP3	725 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	RHOXF1	Q8NHV9	184 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	TFAP2C	Q92754	450 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	SLAMF9	Q96A28	289 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	FGGY	Q96C11	551 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	LGALS12	Q96DT0	336 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	BORCS8	Q96FH0	119 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	CEP19	Q96LK0	163 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635		Q96MT0	163 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	RDH12	Q96NR8	316 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MBOAT4	Q96T53	435 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	CHST5	Q9GZS9	411 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM234A	Q9H0X4	552 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	HEXA-AS1	Q9H8Q6	139 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	SEBOX	Q9HB31	216 aa	Predicted RBP	5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	C19orf12	Q9NSK7	152 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	FAM118A	Q9NWS6	357 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	MTCH1	Q9NZJ7	389 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	C1RL	Q9NZP8	487 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	AASS	Q9UDR5	926 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	OR14J1	Q9UGF5	321 aa		5.66	□□□□□ -1.5
SF3B3-209	ENST00000567635	LOC100130705	A0A1B0GUX0	176 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	MEIOC	A2RUB1	952 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	BTBD17	A6NE02	478 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635		F8VVB4	439 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635		F8VWA3	439 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	ANGPTL7	O43827	346 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	INMT	O95050	263 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	FADS2	O95864	444 aa	Known RBP	5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	CYB5A	P00167	134 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	PAH	P00439	452 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	ZNF20	P17024	532 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	NAT1	P18440	290 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	GABRB1	P18505	474 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	ATF1	P18846	271 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	SAA4	P35542	130 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	RBP2	P50120	134 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	NANOS3	P60323	173 aa	Known RBP	5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACTA2	P62736	377 aa		5.65	□□□□□ -1.5
SF3B3-209	ENST00000567635	ACTG2	P63267	376 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms