RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 GATA3P23771 443 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 CALRP27797 417 aaKnown RBP16.94■□□□□ 0.3
RNF40-210ENST00000566811 IL2RGP31785 369 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 PTGFRP43088 359 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 PITPNBP48739 271 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 MTNR1BP49286 362 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 IL13RA1P78552 427 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 INSL4Q14641 139 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 ELP2Q6IA86 826 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 CRIP3Q6Q6R5 217 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 ASCL4Q6XD76 172 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 JAGN1Q8N5M9 183 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 OR5D18Q8NGL1 313 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 EMG1Q92979 244 aaKnown RBP16.94■□□□□ 0.3
RNF40-210ENST00000566811 RFT1Q96AA3 541 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 SSBP3Q9BWW4 388 aaPredicted RBP16.94■□□□□ 0.3
RNF40-210ENST00000566811 FAM192AQ9GZU8 254 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 CLN8Q9UBY8 286 aa16.94■□□□□ 0.3
RNF40-210ENST00000566811 TRAV1-2A0A0B4J238 106 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 TRAV20A0A0B4J274 112 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 PDCD5O14737 125 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 SPRY1O43609 319 aaPredicted RBP16.93■□□□□ 0.3
RNF40-210ENST00000566811 UBBP0CG47 229 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 PSG2P11465 335 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 GNB2P62879 340 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 HNRNPA0Q13151 305 aaKnown RBP16.93■□□□□ 0.3
RNF40-210ENST00000566811 ZNF146Q15072 292 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 FAM27D1Q5T7N8 215 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 FAM166AQ6J272 317 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 GDPGP1Q6ZNW5 385 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 ZNF788Q6ZQV5 615 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 FAM58AQ8N1B3 248 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 ZNF561Q8N587 486 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 C19orf18Q8NEA5 215 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 Q8NFD4 153 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 ORAI1Q96D31 301 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 MSI2Q96DH6 328 aaKnown RBP16.93■□□□□ 0.3
RNF40-210ENST00000566811 SDSLQ96GA7 329 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 METTL9Q9H1A3 318 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 ZNF222Q9UK12 451 aa16.93■□□□□ 0.3
RNF40-210ENST00000566811 IGHV3OR15-7A0A075B7D8 119 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 SIGLEC5O15389 551 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 CD36P16671 472 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 BCL3P20749 454 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 DVL1P1P54792 670 aaPredicted RBP16.92■□□□□ 0.3
RNF40-210ENST00000566811 FGF12P61328 243 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 RSU1Q15404 277 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 LRRC10Q5BKY1 277 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 CD276Q5ZPR3 534 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 Q71RC1 249 aaPredicted RBP16.92■□□□□ 0.3
RNF40-210ENST00000566811 LRRTM1Q86UE6 522 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 GLCCI1Q86VQ1 547 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 MRPS24Q96EL2 167 aaKnown RBP16.92■□□□□ 0.3
RNF40-210ENST00000566811 DMRTB1Q96MA1 342 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 ZNF488Q96MN9 340 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 SMR3AQ99954 134 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 HMG20AQ9NP66 347 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 OR5V1Q9UGF6 321 aa16.92■□□□□ 0.3
RNF40-210ENST00000566811 CSPG4Q6UVK1 2322 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 IGKV1D-17A0A075B6S4 117 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 FAM157AC9JC47 383 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 ANGPTL7O43827 346 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 ECDO95905 644 aaPredicted RBP16.91■□□□□ 0.3
RNF40-210ENST00000566811 CSTBP04080 98 aaKnown RBP16.91■□□□□ 0.3
RNF40-210ENST00000566811 SMIM18P0DKX4 95 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 CD37P11049 281 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 PRKACAP17612 351 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 OR3A4PP47883 348 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 CAPZA1P52907 286 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 GMFBP60983 142 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 NHLRC3Q5JS37 347 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 WDR25Q64LD2 544 aaPredicted RBP16.91■□□□□ 0.3
RNF40-210ENST00000566811 CLEC9AQ6UXN8 241 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 LINC00596Q86U02 117 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 LYPD6Q86Y78 171 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 OR6M1Q8NGM8 313 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 TBC1D15Q8TC07 691 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 FAM234AQ9H0X4 552 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 RBFOX1Q9NWB1 397 aaKnown RBP16.91■□□□□ 0.3
RNF40-210ENST00000566811 MRPS28Q9Y2Q9 187 aaKnown RBP16.91■□□□□ 0.3
RNF40-210ENST00000566811 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
RNF40-210ENST00000566811 NSD1Q96L73 2696 aaPredicted RBP16.9■□□□□ 0.3
RNF40-210ENST00000566811 IGKV1-12A0A0C4DH73 117 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 RFPL4AA6NLU0 287 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 RFPL4AL1F8VTS6 287 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 NDUFB3O43676 98 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 IGKV1D-12P01611 117 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 CHRM2P08172 466 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 ZNF16P17020 682 aaPredicted RBP16.9■□□□□ 0.3
RNF40-210ENST00000566811 ADRA2CP18825 462 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 NPBWR2P48146 333 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 CAV3P56539 151 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 AWAT2Q6E213 333 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 ZNF841Q6ZN19 808 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 CHST4Q8NCG5 386 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 OR51T1Q8NGJ9 327 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 TMEM186Q96B77 213 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 PPIL3Q9H2H8 161 aaKnown RBP16.9■□□□□ 0.3
RNF40-210ENST00000566811 CNTD2Q9H8S5 307 aa16.9■□□□□ 0.3
RNF40-210ENST00000566811 EXOSC4Q9NPD3 245 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms