RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 AMBNQ9NP70 447 aa11.94□□□□□ -0.5
FANCA-220ENST00000566409 IL36RNQ9UBH0 155 aa11.94□□□□□ -0.5
FANCA-220ENST00000566409 MYRFQ9Y2G1 1151 aa11.94□□□□□ -0.5
FANCA-220ENST00000566409 A0A1B0GUS0 222 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 TMEM82A0PJX8 343 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 OR4C45A6NMZ5 311 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 J3QLW9 94 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 ZNF19P17023 458 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 NPBWR2P48146 333 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 CCR9P51686 369 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 TMEM244Q5VVB8 128 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 CRIP3Q6Q6R5 217 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 Q6ZSV7 163 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 LHFPL3Q86UP9 236 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 PQLC1Q8N2U9 271 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 ZSCAN4Q8NAM6 433 aaPredicted RBP11.93□□□□□ -0.5
FANCA-220ENST00000566409 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 PP6455Q8WZ26 134 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 BORCS8Q96FH0 119 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 C4orf36Q96KX1 117 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 C9orf16Q9BUW7 83 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 FAM234AQ9H0X4 552 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
FANCA-220ENST00000566409 VPREB3Q9UKI3 123 aa11.93□□□□□ -0.5
FANCA-220ENST00000566409 CAB39Q9Y376 341 aaPredicted RBP11.93□□□□□ -0.5
FANCA-220ENST00000566409 SF3B6Q9Y3B4 125 aaKnown RBP11.93□□□□□ -0.5
FANCA-220ENST00000566409 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
FANCA-220ENST00000566409 EBAG9O00559 213 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 ANGPTL7O43827 346 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 SERPINA3P01011 423 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 IGHA1P01876 353 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 DBTP11182 482 aaKnown RBP11.92□□□□□ -0.5
FANCA-220ENST00000566409 PIPP12273 146 aaPredicted RBP11.92□□□□□ -0.5
FANCA-220ENST00000566409 ATF1P18846 271 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 RBP2P50120 134 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 C17orf107Q6ZR85 190 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 ZBTB49Q6ZSB9 765 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 UTS2BQ765I0 119 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 EGFL6Q8IUX8 553 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 DNAAF1Q8NEP3 725 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 OR52N4Q8NGI2 321 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 APH1BQ8WW43 257 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 RBFOX1Q9NWB1 397 aaKnown RBP11.92□□□□□ -0.5
FANCA-220ENST00000566409 FAM118AQ9NWS6 357 aa11.92□□□□□ -0.5
FANCA-220ENST00000566409 IGKV1-12A0A0C4DH73 117 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 LOC100130705A0A1B0GUX0 176 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 C17orf98A8MV24 154 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 E9PI62 339 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 PAHP00439 452 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 IGKV1D-12P01611 117 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 CHRM2P08172 466 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 HTR1AP08908 422 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 CALCBP10092 127 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 BCL3P20749 454 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 AZGP1P25311 298 aaKnown RBP11.91□□□□□ -0.5
FANCA-220ENST00000566409 DUSP1P28562 367 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 ATP1B3P54709 279 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 MTCP1P56278 107 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 PROK1P58294 105 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 ALKBH1Q13686 389 aaKnown RBP11.91□□□□□ -0.5
FANCA-220ENST00000566409 GALEQ14376 348 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 CNN3Q15417 329 aaKnown RBP11.91□□□□□ -0.5
FANCA-220ENST00000566409 MIDNQ504T8 468 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 GDPGP1Q6ZNW5 385 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 TCF23Q7RTU1 214 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 C10orf67Q8IYJ2 551 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 ASCC1Q8N9N2 400 aaKnown RBP11.91□□□□□ -0.5
FANCA-220ENST00000566409 CITED1Q99966 193 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 ALG8Q9BVK2 526 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 MEGF9Q9H1U4 602 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 ERVK13-1Q9NX77 482 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 RNF114Q9Y508 228 aa11.91□□□□□ -0.5
FANCA-220ENST00000566409 SNTNA6NMZ2 147 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 PSPNO60542 156 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 POU3F4P49335 361 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 BMXP51813 675 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 SMN1Q16637 294 aaKnown RBP11.9□□□□□ -0.5
FANCA-220ENST00000566409 LDLRAD2Q5SZI1 272 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 ZNF782Q6ZMW2 699 aaPredicted RBP11.9□□□□□ -0.5
FANCA-220ENST00000566409 OR8H2Q8N162 312 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 DYNAPQ8N1N2 210 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 SYS1Q8N2H4 156 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 OR52I1Q8NGK6 324 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 OR5R1Q8NH85 324 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 PPP1R35Q8TAP8 253 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 PIFOQ8TCI5 191 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 EMG1Q92979 244 aaKnown RBP11.9□□□□□ -0.5
FANCA-220ENST00000566409 SPACA5Q96QH8 159 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 SSX3Q99909 188 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 C16orf95Q9H693 158 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 HEXA-AS1Q9H8Q6 139 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.5
FANCA-220ENST00000566409 MRPS18AQ9NVS2 196 aaKnown RBP11.9□□□□□ -0.5
FANCA-220ENST00000566409 HHLA2Q9UM44 414 aa11.9□□□□□ -0.5
FANCA-220ENST00000566409 TRBV2A0A0J9YWF9 115 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 A0A1W2PPH5 198 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 FAM90A8PA6NJQ4 464 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 H3BUX3 64 aa11.89□□□□□ -0.51
FANCA-220ENST00000566409 WBP4O75554 376 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms