RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 FAM216BQ8N7L0 139 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 ZSCAN4Q8NAM6 433 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 Q8NFD4 153 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 PXT1Q8NFP0 134 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 ZNF671Q8TAW3 534 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 TNFAIP8L1Q8WVP5 186 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 C12orf43Q96C57 262 aaKnown RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 GAFA1Q96PS6 74 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 CHCHD6Q9BRQ6 235 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 FUNDC2Q9BWH2 189 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 FAM192AQ9GZU8 254 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 NAA50Q9GZZ1 169 aaKnown RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 KCNK15Q9H427 330 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 ZNF665Q9H7R5 613 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 CNTD2Q9H8S5 307 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 SMURF1Q9HCE7 757 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 TCF7L1Q9HCS4 588 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 EXOSC4Q9NPD3 245 aaKnown RBP6.81□□□□□ -1.32
CDH13-208ENST00000566333 SNTG1Q9NSN8 517 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 IL36GQ9NZH8 169 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 NLKQ9UBE8 527 aa6.81□□□□□ -1.32
CDH13-208ENST00000566333 TRAV38-1A0A0B4J264 116 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 LOC100506127A0A0U1RQW1 187 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 A0A1W2PP11 408 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 OR2AT4A6NND4 320 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 KIAA1324LA8MWY0 1029 aaPredicted RBP6.8□□□□□ -1.32
CDH13-208ENST00000566333 A8MXK9 166 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 SLC22A1O15245 554 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 MAGEB3O15480 346 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 NXPH2O95156 264 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 GABARAPO95166 117 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 CDRT1O95170 752 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 KNG1P01042 644 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 TMEM225BP0DP42 221 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 PSG2P11465 335 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 RPS2P15880 293 aaKnown RBP6.8□□□□□ -1.32
CDH13-208ENST00000566333 MTNR1BP49286 362 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 MICBQ29980 383 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 C1orf100Q5SVJ3 147 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 ELP2Q6IA86 826 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 ZNF841Q6ZN19 808 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 SATL1Q86VE3 508 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 CDH26Q8IXH8 852 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 MKXQ8IYA7 352 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 Q8IYB0 196 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 FGFRL1Q8N441 504 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 CD177Q8N6Q3 437 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 DEFB108BQ8NET1 73 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 OR5T2Q8NGG2 359 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 OR10K1Q8NGX5 313 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 OR51F2Q8NH61 342 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 TBC1D15Q8TC07 691 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 EMG1Q92979 244 aaKnown RBP6.8□□□□□ -1.32
CDH13-208ENST00000566333 SLC25A28Q96A46 364 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 GPER1Q99527 375 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 UQCC2Q9BRT2 126 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 PATZ1Q9HBE1 687 aaKnown RBP6.8□□□□□ -1.32
CDH13-208ENST00000566333 NEK6Q9HC98 313 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 HMG20AQ9NP66 347 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 RASL12Q9NYN1 266 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 ZNF581Q9P0T4 197 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 KAAG1Q9UBP8 84 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 DNAJB11Q9UBS4 358 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 SSR3Q9UNL2 185 aa6.8□□□□□ -1.32
CDH13-208ENST00000566333 MRPS28Q9Y2Q9 187 aaKnown RBP6.8□□□□□ -1.32
CDH13-208ENST00000566333 SMIM30A4D0T7 59 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 MEGF11A6BM72 1044 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 RFPL4AA6NLU0 287 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 RFPL4AL1F8VTS6 287 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 TRAPPC2LH3BP13 241 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 SLC17A2O00624 439 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 SMAD7O15105 426 aaKnown RBP6.79□□□□□ -1.32
CDH13-208ENST00000566333 SIGLEC5O15389 551 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 AIREO43918 545 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 ZNF737O75373 536 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 WNT2P09544 360 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 CLEC2LP0C7M8 214 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 CALCBP10092 127 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
CDH13-208ENST00000566333 PRKACAP17612 351 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 MYL9P24844 172 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 SDC2P34741 201 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 RBM11P57052 281 aaKnown RBP6.79□□□□□ -1.32
CDH13-208ENST00000566333 FGF12P61328 243 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 NCS1P62166 190 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 QRFPP83859 136 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 ZNF146Q15072 292 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 CTF1Q16619 201 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 DGUOKQ16854 277 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 PIGYQ3MUY2 71 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 TIMM50Q3ZCQ8 353 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 NHLRC3Q5JS37 347 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 ATPAF1Q5TC12 328 aaPredicted RBP6.79□□□□□ -1.32
CDH13-208ENST00000566333 GLT8D1Q68CQ7 371 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 AWAT2Q6E213 333 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 ZNF788Q6ZQV5 615 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 FAM58AQ8N1B3 248 aa6.79□□□□□ -1.32
CDH13-208ENST00000566333 PNLDC1Q8NA58 520 aaKnown RBP6.79□□□□□ -1.32
CDH13-208ENST00000566333 TMEM104Q8NE00 496 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms