RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ESRRGP62508 458 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 BLCAPP62952 87 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 CNN3Q15417 329 aaKnown RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 FAM189A2Q15884 450 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 SSX2Q16385 188 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 ZSCAN26Q16670 478 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 PLA1AQ53H76 456 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 OXLD1Q5BKU9 147 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 NXNL2Q5VZ03 156 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 C12orf73Q69YU5 71 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 TCF23Q7RTU1 214 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 CATSPERDQ86XM0 798 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 TMEM219Q86XT9 240 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 SLC35F2Q8IXU6 374 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 TCEANCQ8N8B7 351 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 DTX3Q8N9I9 347 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 OR13D1Q8NGV5 346 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 RNF166Q96A37 237 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 MNTQ99583 582 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 NKX3-1Q99801 234 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 WNT10AQ9GZT5 417 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 CLN6Q9NWW5 311 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 GTF2A1LQ9UNN4 478 aa6.91□□□□□ -1.3
CAPN3-213ENST00000565173 TBL2Q9Y4P3 447 aaKnown RBP6.91□□□□□ -1.3
CAPN3-213ENST00000565173 NOTCH3Q9UM47 2321 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 DSCAML1Q8TD84 2053 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 ERICH4A6NGS2 130 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 ZNF670-ZNF695F2Z2N8 137 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 MITFO75030 526 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 RPP14O95059 124 aaKnown RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 CHRM2P08172 466 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 ACTR3P61158 418 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 EMX1Q04741 257 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 KPNB1Q14974 876 aaKnown RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 NSUN5P1Q3KNT7 163 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 SLX4IPQ5VYV7 408 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 OR8H2Q8N162 312 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 ASCC1Q8N9N2 400 aaKnown RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 OR52N4Q8NGI2 321 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 TRMT10AQ8TBZ6 339 aaKnown RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 TMEM163Q8TC26 289 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 RPS4Y2Q8TD47 263 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 SNX22Q96L94 193 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 CEP19Q96LK0 163 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 IL4I1Q96RQ9 567 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 CITED2Q99967 270 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 OCSTAMPQ9BR26 566 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 SEBOXQ9HB31 216 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-213ENST00000565173 IL36RNQ9UBH0 155 aa6.9□□□□□ -1.3
CAPN3-213ENST00000565173 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
CAPN3-213ENST00000565173 KMT2CQ8NEZ4 4911 aaKnown RBP6.89□□□□□ -1.31
CAPN3-213ENST00000565173 FAM230AA0A1W2PPH8 454 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 A0A1W2PQL4 384 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-213ENST00000565173 FAM90A22PA8MWA6 464 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 H3BSH0 61 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 PSPNO60542 156 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 FBXO24O75426 580 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 IGHA1P01876 353 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 FUT6P51993 359 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 EDDM3BP56851 147 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ACTA2P62736 377 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ACTG2P63267 376 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ACTC1P68032 377 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ACTA1P68133 377 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 MEF2CQ06413 473 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ODF4Q2M2E3 257 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 KDM4DQ6B0I6 523 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 GDPD3Q7L5L3 318 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 REC114Q7Z4M0 266 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 NDUFA11Q86Y39 141 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 PRSS35Q8N3Z0 413 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 TPRX1Q8N7U7 411 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 WFDC9Q8NEX5 89 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 SLAMF9Q96A28 289 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 FOXRED1Q96CU9 486 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ZNF714Q96N38 554 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 PRSS22Q9GZN4 317 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 KRT84Q9NSB2 600 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 H2AFY2Q9P0M6 372 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-213ENST00000565173 PITPNC1Q9UKF7 332 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 SLC7A11Q9UPY5 501 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 ZNF281Q9Y2X9 895 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 AP4S1Q9Y587 144 aa6.89□□□□□ -1.31
CAPN3-213ENST00000565173 IGHV2-26A0A0B4J1V2 119 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 IGKV1-9A0A0C4DH69 117 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 hADV38S2A0JD32 116 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 METTL15A6NJ78 407 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 ANKRD65E5RJM6 399 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 G3V2T6 193 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 SYT7O43581 403 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 XPNPEP2O43895 674 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 SULT1C4O75897 302 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 MMP23AO75900 390 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 INMTO95050 263 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 APOL3O95236 402 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 OR2T7P0C7T2 308 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 FASP25445 335 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 DUSP1P28562 367 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 HTR1FP30939 366 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 POLR2IP36954 125 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms