RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 RPS5P46782 204 aaKnown RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 OR1G1P47890 313 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 AP1S2P56377 157 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 OR1Q1Q15612 314 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 OR2T5Q6IEZ7 315 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 RWDD4Q6NW29 188 aaKnown RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 UNC93AQ86WB7 457 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 MICU2Q8IYU8 434 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 COMMD1Q8N668 190 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 OR4C13Q8NGP0 309 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 OR2T29Q8NH02 315 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 PHOSPHO2Q8TCD6 241 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 TSEN15Q8WW01 171 aaKnown RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 PEX13Q92968 403 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 KIAA1143Q96AT1 154 aaPredicted RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 ALS2CR12Q96Q35 445 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 DSN1Q9H410 356 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 AHSPQ9NZD4 102 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 SAR1BQ9Y6B6 198 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 BTAF1O14981 1849 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 RGPD1P0DJD0 1748 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 PARP4Q9UKK3 1724 aaKnown RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 PAPPAQ13219 1627 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 C10orf71Q711Q0 1435 aa1.65□□□□□ -2.15
PALB2-203ENST00000565038 SMG6Q86US8 1419 aaKnown RBP1.65□□□□□ -2.15
PALB2-203ENST00000565038 COL4A5P29400 1685 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 RREB1Q92766 1687 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 QRICH2Q9H0J4 1663 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 SHANK3Q9BYB0 1731 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 KCNE1BA0A087WTH5 132 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 H0YC42 278 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 C3orf84H3BNL1 204 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 PSPHP1O15172 72 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 AKR7A2O43488 359 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 CTNSO60931 367 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 KRT16P08779 473 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 UBCP0CG48 685 aaKnown RBP1.64□□□□□ -2.15
PALB2-203ENST00000565038 RALBP11234 206 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 SFTPCP11686 197 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 IL3RAP26951 378 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 IRF8Q02556 426 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 KDSRQ06136 332 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 ZNF33AQ06730 810 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 TFDP2Q14188 446 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 GABRA6Q16445 453 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 ZNF660Q6AZW8 331 aaPredicted RBP1.64□□□□□ -2.15
PALB2-203ENST00000565038 OTUD6AQ7L8S5 288 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 PDPNQ86YL7 162 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 PQLC3Q8N755 202 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 LRRC75AQ8NAA5 344 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 CMTM2Q8TAZ6 248 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 ASZ1Q8WWH4 475 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 RXFP2Q8WXD0 754 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 RBPMSQ93062 196 aaKnown RBP1.64□□□□□ -2.15
PALB2-203ENST00000565038 IGF2BP2-AS1Q96M15 143 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 CFAP53Q96M91 514 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 OR2V2Q96R30 315 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 CLSTN2Q9H4D0 955 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 ELOVL6Q9H5J4 265 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 AUNIPQ9H7T9 357 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 PARP11Q9NR21 331 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 FBXO8Q9NRD0 319 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 MYEF2Q9P2K5 600 aaKnown RBP1.64□□□□□ -2.15
PALB2-203ENST00000565038 PSME2Q9UL46 239 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 DDX19BQ9UMR2 479 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 SLC22A7Q9Y694 548 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 SPTBN5Q9NRC6 3674 aaKnown RBP1.64□□□□□ -2.15
PALB2-203ENST00000565038 ZBED9Q6R2W3 1325 aa1.64□□□□□ -2.15
PALB2-203ENST00000565038 MAP2P11137 1827 aaKnown RBP1.63□□□□□ -2.15
PALB2-203ENST00000565038 RTL9Q8NET4 1388 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 CICQ96RK0 1608 aaPredicted RBP1.63□□□□□ -2.15
PALB2-203ENST00000565038 AKAP12Q02952 1782 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 ABCC6O95255 1503 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 GOLGA6L4A6NEF3 574 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 E7EQL1 145 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 IGHG2P01859 326 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 THRAP10827 490 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 BCAP31P51572 246 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 DOC2AQ14183 400 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 ITIH4Q14624 930 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 ZNF141Q15928 474 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 HADHQ16836 314 aaKnown RBP1.63□□□□□ -2.15
PALB2-203ENST00000565038 KLHL40Q2TBA0 621 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 PIP5KL1Q5T9C9 394 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 LIN9Q5TKA1 542 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 HHATQ5VTY9 493 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 PLCXD3Q63HM9 321 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 AMMECR1LQ6DCA0 310 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 MORN3Q6PF18 240 aaPredicted RBP1.63□□□□□ -2.15
PALB2-203ENST00000565038 FAM184AQ8NB25 1140 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 ZNF420Q8TAQ5 688 aaPredicted RBP1.63□□□□□ -2.15
PALB2-203ENST00000565038 SCGB3A2Q96PL1 93 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 STACQ99469 402 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 NCOR1P1Q9H4R4 102 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 VSIRQ9H7M9 311 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 CRLF2Q9HC73 371 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 LYRM4Q9HD34 91 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 ZC4H2Q9NQZ6 224 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 HEBP1Q9NRV9 189 aa1.63□□□□□ -2.15
PALB2-203ENST00000565038 TREX1Q9NSU2 369 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms