RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 HHLA2Q9UM44 414 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 SLC7A11Q9UPY5 501 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 MAB21L2Q9Y586 359 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 KPTNQ9Y664 436 aa11.22□□□□□ -0.61
VPS9D1-204ENST00000565023 TRBV2A0A0J9YWF9 115 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 A0A0U1RQK1 487 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 PQLC2LA1A4F0 135 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 RFPL4AA6NLU0 287 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 PTGES3LE9PB15 166 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 RFPL4AL1F8VTS6 287 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 J3QT63 122 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 OGG1O15527 345 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 NXPH2O95156 264 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 LALBAP00709 142 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 SLC35A2P78381 396 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 FOXL1Q12952 345 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 CDK5R1Q15078 307 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 UBE2V2Q15819 145 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 RNLSQ5VYX0 342 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 C16orf87Q6PH81 154 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 FIP1L1Q6UN15 594 aaKnown RBP11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 CALHM1Q8IU99 346 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 PNKDQ8N490 385 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 OR51A4Q8NGJ6 313 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 OR5AK2Q8NH90 309 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 PP6455Q8WZ26 134 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 MYDGFQ969H8 173 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 ADAT3Q96EY9 351 aaPredicted RBP11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 CNBD2Q96M20 576 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 PDCD1LG2Q9BQ51 273 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 CHST5Q9GZS9 411 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 DUSP21Q9H596 190 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 PAK1IP1Q9NWT1 392 aaPredicted RBP11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 ZNF222Q9UK12 451 aa11.21□□□□□ -0.61
VPS9D1-204ENST00000565023 GPR37O15354 613 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 GATBO75879 557 aaKnown RBP11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 MELTFP08582 738 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 PGA5P0DJD9 388 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 CRHBPP24387 322 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 BPIFB3P59826 476 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 SMIM21Q3B7S5 101 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 Q6YL49 198 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 UTS2BQ765I0 119 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 CD177Q8N6Q3 437 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 Q8N7P7 452 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 NANOGP1Q8N7R0 232 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 SGCDQ92629 289 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 SLAMF9Q96A28 289 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 FGGYQ96C11 551 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 COMMD4Q9H0A8 199 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 POLDIP2Q9Y2S7 368 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 TPRKBQ9Y3C4 175 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 FAM96BQ9Y3D0 163 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 PCDHGB5Q9Y5G0 923 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 SIRT4Q9Y6E7 314 aaPredicted RBP11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 TGP01266 2768 aa11.2□□□□□ -0.62
VPS9D1-204ENST00000565023 MEX3AA1L020 520 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 MYL12BO14950 172 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 DENRO43583 198 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 SERPINA3P01011 423 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 CRYBA1P05813 215 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 EEF1B2P24534 225 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 PRDX2P32119 198 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 WNT4P56705 351 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 BLMHQ13867 455 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 C11orf91Q3C1V1 193 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 DMKNQ6E0U4 476 aaPredicted RBP11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 OR4M1Q8NGD0 313 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 OR13C3Q8NGS6 347 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 RGP1Q92546 391 aaPredicted RBP11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 SMIM19Q96E16 107 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 BORCS8Q96FH0 119 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 UNKLQ9H9P5 680 aaKnown RBP11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 NOX4Q9NPH5 578 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 C19orf12Q9NSK7 152 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 RASL12Q9NYN1 266 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 ERGIC3Q9Y282 383 aa11.19□□□□□ -0.62
VPS9D1-204ENST00000565023 IGKV1-27A0A075B6S5 117 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 IGKV1-9A0A0C4DH69 117 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 CLDN34H7C241 214 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 CALCBP10092 127 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 ZNF20P17024 532 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 MDKP21741 143 aaPredicted RBP11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 POU3F4P49335 361 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 FUT6P51993 359 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 SNU13P55769 128 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 CAV3P56539 151 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 TAS2R43P59537 309 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 DOC2BQ14184 412 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 IRF3Q14653 427 aa11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 CNN3Q15417 329 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 RBM48Q5RL73 367 aaKnown RBP11.18□□□□□ -0.62
VPS9D1-204ENST00000565023 SLC25A26Q70HW3 274 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms