RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DDI2Q5TDH0 399 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF773Q6PK81 442 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 UNQ9370/PRO34162Q6UXP9 181 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF841Q6ZN19 808 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF788Q6ZQV5 615 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 PHC2Q8IXK0 858 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 FAM58AQ8N1B3 248 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 OR51A2Q8NGJ7 313 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 TNFAIP8L1Q8WVP5 186 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 RAB40AQ8WXH6 277 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ST8SIA4Q92187 359 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 EMG1Q92979 244 aaKnown RBP13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ORAI1Q96D31 301 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 MRI1Q9BV20 369 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 SLITRK2Q9H156 845 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 C7orf69Q9H7B7 122 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 HES4Q9HCC6 221 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 PCDHB16Q9NRJ7 776 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 CTSZQ9UBR2 303 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 ING4Q9UNL4 249 aa13.3□□□□□ -0.28
RAB40C-208ENST00000564703 MTORP42345 2549 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 IGKV1D-17A0A075B6S4 117 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 SIGLEC5O15389 551 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 LIPFP07098 398 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 CHRM2P08172 466 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 IGFBP3P17936 291 aaPredicted RBP13.29□□□□□ -0.28
RAB40C-208ENST00000564703 FSTP19883 344 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 BCL3P20749 454 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 SRP14P37108 136 aaKnown RBP13.29□□□□□ -0.28
RAB40C-208ENST00000564703 BMXP51813 675 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 ZNF561Q8N587 486 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 FAM216BQ8N7L0 139 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 PHYHIPQ92561 330 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 NUDT16L1Q9BRJ7 211 aaKnown RBP13.29□□□□□ -0.28
RAB40C-208ENST00000564703 FAM192AQ9GZU8 254 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 MMP26Q9NRE1 261 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 SLC25A10Q9UBX3 287 aaPredicted RBP13.29□□□□□ -0.28
RAB40C-208ENST00000564703 VPS13CQ709C8 3753 aa13.29□□□□□ -0.28
RAB40C-208ENST00000564703 KIR2DS1A0A191URI9 304 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 KIAA1324LA8MWY0 1029 aaPredicted RBP13.28□□□□□ -0.28
RAB40C-208ENST00000564703 SH2D1BO14796 132 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 ENSAO43768 121 aaKnown RBP13.28□□□□□ -0.28
RAB40C-208ENST00000564703 CRLF1O75462 422 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 ARL6IP5O75915 188 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 KDM4BO94953 1096 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 TNFAIP8O95379 198 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 NDUFB7P17568 137 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 PRKACAP17612 351 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 PSMB9P28065 219 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 PTGFRP43088 359 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 NPBWR2P48146 333 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 RSU1Q15404 277 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 HSD17B12Q53GQ0 312 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 BTN2A1Q7KYR7 527 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 CDH26Q8IXH8 852 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 JAGN1Q8N5M9 183 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 ZNRF1Q8ND25 227 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 TMEM185AQ8NFB2 350 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 PXT1Q8NFP0 134 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 H1FXQ92522 213 aaKnown RBP13.28□□□□□ -0.28
RAB40C-208ENST00000564703 SDSLQ96GA7 329 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 GAFA1Q96PS6 74 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 METTL9Q9H1A3 318 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 RBFOX1Q9NWB1 397 aaKnown RBP13.28□□□□□ -0.28
RAB40C-208ENST00000564703 INSIG2Q9Y5U4 225 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 AUP1Q9Y679 476 aa13.28□□□□□ -0.28
RAB40C-208ENST00000564703 TRAV8-7A0A075B6U6 113 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 IGHV2-70DA0A0C4DH43 119 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 F8VVB4 439 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 F8VWA3 439 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 GABRPO00591 440 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 PIN1P1O15428 100 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 RGS9O75916 674 aaPredicted RBP13.27□□□□□ -0.29
RAB40C-208ENST00000564703 CSTBP04080 98 aaKnown RBP13.27□□□□□ -0.29
RAB40C-208ENST00000564703 SRMP19623 302 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 AMY2BP19961 511 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 GABRA5P31644 462 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 RPS25P62851 125 aaKnown RBP13.27□□□□□ -0.29
RAB40C-208ENST00000564703 SPIN3Q5JUX0 258 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 UBE2UQ5VVX9 321 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 ASPHD2Q6ICH7 369 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 CD177Q8N6Q3 437 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 NKAIN3Q8N8D7 197 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 FOXRED1Q96CU9 486 aaPredicted RBP13.27□□□□□ -0.29
RAB40C-208ENST00000564703 VCX3AQ9NNX9 186 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 HMG20AQ9NP66 347 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 GSTK1Q9Y2Q3 226 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 MAB21L2Q9Y586 359 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 ABCA2Q9BZC7 2435 aa13.27□□□□□ -0.29
RAB40C-208ENST00000564703 A0A087WXM4 84 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 CCRL2O00421 344 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 HTR3BO95264 441 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 TFF1P04155 84 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 CALCBP10092 127 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 SONP18583 2426 aaKnown RBP13.26□□□□□ -0.29
RAB40C-208ENST00000564703 MTNR1BP49286 362 aa13.26□□□□□ -0.29
RAB40C-208ENST00000564703 SNU13P55769 128 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms