RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 TCF23Q7RTU1 214 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 OR8H2Q8N162 312 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 OR8D4Q8NGM9 314 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 ISOC1Q96CN7 298 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 SNX22Q96L94 193 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 TSSK6Q9BXA6 273 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 DCLRE1BQ9H816 532 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 MED20Q9H944 212 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 DCAF13Q9NV06 445 aaKnown RBP5.77□□□□□ -1.49
VPS4A-203ENST00000564399 IL20Q9NYY1 176 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 ENPP5Q9UJA9 477 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 HHLA2Q9UM44 414 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 SAMD4AQ9UPU9 718 aaKnown RBP5.77□□□□□ -1.49
VPS4A-203ENST00000564399 LINC00312Q9Y6C7 94 aa5.77□□□□□ -1.49
VPS4A-203ENST00000564399 ARRDC5A6NEK1 342 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 FAM183AA6NL82 134 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 NDUFAB1O14561 156 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 TOR1AO14656 332 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 ZNF737O75373 536 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 INMTO95050 263 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 RPLP1P05386 114 aaKnown RBP5.76□□□□□ -1.49
VPS4A-203ENST00000564399 FRMD6-AS1P0C7T7 363 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 ATP6V1B1P15313 513 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 ZNF3P17036 446 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 GABRR1P24046 479 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 PEX2P28328 305 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 RRM2P31350 389 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 ESRRGP62508 458 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 HES1Q14469 280 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 RBM39Q14498 530 aaKnown RBP5.76□□□□□ -1.49
VPS4A-203ENST00000564399 HNF4GQ14541 408 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 KIR2DS1Q14954 304 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 GRK1Q15835 563 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 CXorf66Q5JRM2 361 aaPredicted RBP5.76□□□□□ -1.49
VPS4A-203ENST00000564399 FAM27D1Q5T7N8 215 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 PRAMEF5Q5TYX0 476 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 OR52W1Q6IF63 320 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 CCDC144NLQ6NUI1 221 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 TEX38Q6PEX7 206 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 BAIAP2L2Q6UXY1 529 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 KRT74Q7RTS7 529 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 SLC35E3Q7Z769 313 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 RTN4RL2Q86UN3 420 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 ANGPTL5Q86XS5 388 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 FOXRED2Q8IWF2 684 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 OR51E1Q8TCB6 317 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 MCUR1Q96AQ8 359 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 CREB3L1Q96BA8 519 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 ATP6V1G3Q96LB4 118 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 HOPXQ9BPY8 73 aaPredicted RBP5.76□□□□□ -1.49
VPS4A-203ENST00000564399 CHST6Q9GZX3 395 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 OR51V1Q9H2C8 321 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 HES4Q9HCC6 221 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 GPR173Q9NS66 373 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 TAS2R1Q9NYW7 299 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.76□□□□□ -1.49
VPS4A-203ENST00000564399 BAIAP2Q9UQB8 552 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 SIRT4Q9Y6E7 314 aaPredicted RBP5.76□□□□□ -1.49
VPS4A-203ENST00000564399 DNAH7Q8WXX0 4024 aa5.76□□□□□ -1.49
VPS4A-203ENST00000564399 A0A0U1RQV5 110 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 TMEM269A0A1B0GVZ9 245 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 TMEM82A0PJX8 343 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 PQLC2LA1A4F0 135 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 BUB1B-PAK6H3BSN5 160 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 SELENOFO60613 162 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 SASH3O75995 380 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 SOX14O95416 240 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 TMEM11P17152 192 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 CDK2P24941 298 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 PRRX1P54821 245 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 ERVK11-1P61568 191 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 PNLIPRP3Q17RR3 467 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 CLVS2Q5SYC1 327 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 TPTE2P1Q5T6R2 138 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 LCN1P1Q5VSP4 162 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 SLX4IPQ5VYV7 408 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 RASSF6Q6ZTQ3 369 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 TRPM8Q7Z2W7 1104 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 STPG2Q8N412 459 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 DRAM1Q8N682 238 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 OR2T33Q8NG76 320 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 OR9Q2Q8NGE9 314 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 OTOSQ8NHW6 89 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 ITFG2Q969R8 447 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 RPEQ96AT9 228 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 RNFT2Q96EX2 444 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 PYURFQ96I23 114 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 BTBD10Q9BSF8 475 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 GAL3ST2Q9H3Q3 398 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 IL1RAPQ9NPH3 570 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 GPR84Q9NQS5 396 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 ARMC1Q9NVT9 282 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 GLS2Q9UI32 602 aa5.75□□□□□ -1.49
VPS4A-203ENST00000564399 TRGV10A0A0A0MS01 117 aa5.74□□□□□ -1.49
VPS4A-203ENST00000564399 FAM230AA0A1W2PPH8 454 aa5.74□□□□□ -1.49
VPS4A-203ENST00000564399 ACOD1A6NK06 481 aa5.74□□□□□ -1.49
VPS4A-203ENST00000564399 OOSP1A8MZH6 123 aa5.74□□□□□ -1.49
VPS4A-203ENST00000564399 F8VVB4 439 aa5.74□□□□□ -1.49
VPS4A-203ENST00000564399 F8VWA3 439 aa5.74□□□□□ -1.49
VPS4A-203ENST00000564399 FGF16O43320 207 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms