RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TAF9Q16594 264 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 OR5D13Q8NGL4 314 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 OR4F5Q8NH21 305 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 C17orf50Q8WW18 174 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 APH1BQ8WW43 257 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 DPAGT1Q9H3H5 408 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 ISG20L2Q9H9L3 353 aaKnown RBP16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 HHLA2Q9UM44 414 aa16.31■□□□□ 0.2
SHCBP1-203ENST00000564272 POM121CA8CG34 1229 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 NDUFA7O95182 113 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 PAHP00439 452 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 RBP2P50120 134 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 ATP1B3P54709 279 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 ERVFRD-1P60508 538 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 ALKBH1Q13686 389 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 UTS2BQ765I0 119 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 EGFL6Q8IUX8 553 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 DNAAF1Q8NEP3 725 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 OR13C3Q8NGS6 347 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 EMG1Q92979 244 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 RFT1Q96AA3 541 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 MRPL48Q96GC5 212 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 Q96MT0 163 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 ZNF649Q9BS31 505 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 FAM234AQ9H0X4 552 aa16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 RBFOX1Q9NWB1 397 aaKnown RBP16.3■□□□□ 0.2
SHCBP1-203ENST00000564272 MEX3AA1L020 520 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 K7N7A8 449 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 ZNF737O75373 536 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 FADS2O95864 444 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 CALCBP10092 127 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 BCL3P20749 454 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 PRKACBP22694 351 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 NPBWR2P48146 333 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 MTCP1P56278 107 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 ACSM1Q08AH1 577 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 ZSCAN26Q16670 478 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 SYS1Q8N2H4 156 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 C11orf42Q8N5U0 333 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 ZNF676Q8N7Q3 588 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 OR52I1Q8NGK6 324 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 WFDC12Q8WWY7 111 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 STMN2Q93045 179 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 OPALINQ96PE5 141 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 BEX1Q9HBH7 125 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 ERVK13-1Q9NX77 482 aa16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 SMPD3Q9NY59 655 aaPredicted RBP16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 SF3B6Q9Y3B4 125 aaKnown RBP16.29■□□□□ 0.2
SHCBP1-203ENST00000564272 A0A1W2PPH5 198 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 TMEM82A0PJX8 343 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 BTBD17A6NE02 478 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 E9PI62 339 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 SPRY1O43609 319 aaPredicted RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 CHRM2P08172 466 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 COX7A1P24310 79 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 SNU13P55769 128 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 RPL15P61313 204 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 SRSF4Q08170 494 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 RAB40BQ12829 278 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 SMN1Q16637 294 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 OLFML2AQ68BL7 652 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 ZNF782Q6ZMW2 699 aaPredicted RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 LHFPL2Q6ZUX7 228 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 RNF144BQ7Z419 303 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 OR13C9Q8NGT0 318 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 AJUBAQ96IF1 538 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 SPACA5Q96QH8 159 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 INPP5EQ9NRR6 644 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 VPREB3Q9UKI3 123 aa16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 RPL36Q9Y3U8 105 aaKnown RBP16.28■□□□□ 0.2
SHCBP1-203ENST00000564272 A0A1B0GUS0 222 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 WBP4O75554 376 aaKnown RBP16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 HAND1O96004 215 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 DUSP1P28562 367 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 BMXP51813 675 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 DLX6P56179 175 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 EDDM3BP56851 147 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 MIDNQ504T8 468 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 GDPGP1Q6ZNW5 385 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 Q8IYB0 196 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 ZNF555Q8NEP9 628 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 OR5D18Q8NGL1 313 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 SPSB1Q96BD6 273 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 SLITRK2Q9H156 845 aa16.27■□□□□ 0.2
SHCBP1-203ENST00000564272 TRBV2A0A0J9YWF9 115 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 CLPSL1A2RUU4 121 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 ZFPL1O95159 310 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 CLIC3O95833 236 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 CYB5AP00167 134 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 OCM2P0CE71 109 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 OCMP0CE72 109 aaPredicted RBP16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 PRKACAP17612 351 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 PAX6P26367 422 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 PDZK1IP1Q13113 114 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 EDDM3AQ14507 147 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 LRRC36Q1X8D7 754 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 PRR31Q5SQ13 230 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 C17orf107Q6ZR85 190 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 GDPD3Q7L5L3 318 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 TCF23Q7RTU1 214 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms