RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OCMP0CE72 109 aaPredicted RBP14.39□□□□□ -0.11
NME3-205ENST00000563854 CALCBP10092 127 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 LRRC75BQ2VPJ9 315 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 PLA1AQ53H76 456 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 EGFL6Q8IUX8 553 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 CCDC54Q8NEL0 328 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 OR2G2Q8NGZ5 317 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 ADAT3Q96EY9 351 aaPredicted RBP14.39□□□□□ -0.11
NME3-205ENST00000563854 FAM234AQ9H0X4 552 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 IL36RNQ9UBH0 155 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 AASSQ9UDR5 926 aa14.39□□□□□ -0.11
NME3-205ENST00000563854 K7N7A8 449 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 CLPXO76031 633 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 CYB5AP00167 134 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 HTR1AP08908 422 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 ALDH3A2P51648 485 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 ATP1B3P54709 279 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 OR12D2P58182 307 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 ISL1P61371 349 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 TMEM244Q5VVB8 128 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 ZFP1Q6P2D0 407 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 CBR4Q8N4T8 237 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 TRUB1Q8WWH5 349 aaKnown RBP14.38□□□□□ -0.11
NME3-205ENST00000563854 PP6455Q8WZ26 134 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 RFT1Q96AA3 541 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 FGGYQ96C11 551 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 HRASLS5Q96KN8 279 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 C16orf95Q9H693 158 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 TRRAPQ9Y4A5 3859 aa14.38□□□□□ -0.11
NME3-205ENST00000563854 J3QLW9 94 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 SLC16A6O15403 523 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 HAND1O96004 215 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 ZNF19P17023 458 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 GABRR1P24046 479 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 AZGP1P25311 298 aaKnown RBP14.37□□□□□ -0.11
NME3-205ENST00000563854 DUSP1P28562 367 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 GABRA5P31644 462 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 RBP2P50120 134 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 NANOS3P60323 173 aaKnown RBP14.37□□□□□ -0.11
NME3-205ENST00000563854 MEDAGQ5VYS4 303 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 SLC35E4Q6ICL7 350 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 LHFPL4Q7Z7J7 247 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 C11orf42Q8N5U0 333 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 OR13C3Q8NGS6 347 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 C10orf35Q96D05 121 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 C4orf36Q96KX1 117 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 MBOAT4Q96T53 435 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 CHST6Q9GZX3 395 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 RBFOX1Q9NWB1 397 aaKnown RBP14.37□□□□□ -0.11
NME3-205ENST00000563854 FRRS1LQ9P0K9 344 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 SIGLEC9Q9Y336 463 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 GMPPBQ9Y5P6 360 aa14.37□□□□□ -0.11
NME3-205ENST00000563854 ZNF737O75373 536 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 TSPAN9O75954 239 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 IGHA1P01876 353 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 ARG1P05089 322 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 PRKACAP17612 351 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 ATF1P18846 271 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 BCL3P20749 454 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 NPBWR2P48146 333 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 MTCP1P56278 107 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 SNRPGP62308 76 aaKnown RBP14.36□□□□□ -0.11
NME3-205ENST00000563854 DEFA6Q01524 100 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 DYNC1I2Q13409 638 aaKnown RBP14.36□□□□□ -0.11
NME3-205ENST00000563854 OCLNQ16625 522 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 ASPHD2Q6ICH7 369 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 OR8H2Q8N162 312 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 TPRX1Q8N7U7 411 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 OR10AC1Q8NH08 325 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 RNF166Q96A37 237 aaPredicted RBP14.36□□□□□ -0.11
NME3-205ENST00000563854 AJUBAQ96IF1 538 aa14.36□□□□□ -0.11
NME3-205ENST00000563854 NKX3-1Q99801 234 aaPredicted RBP14.36□□□□□ -0.11
NME3-205ENST00000563854 IGKV1-9A0A0C4DH69 117 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 TMEM82A0PJX8 343 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 SNTNA6NMZ2 147 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 ZNF728P0DKX0 622 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 PRKACBP22694 351 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 DLX6P56179 175 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 ACTA2P62736 377 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 ACTG2P63267 376 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 ZNF91Q05481 1191 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 GRK1Q15835 563 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 LHFPL2Q6ZUX7 228 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 KCTD20Q7Z5Y7 419 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 Q8IYB0 196 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 FAM58AQ8N1B3 248 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 ACBD7Q8N6N7 88 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 ZNF676Q8N7Q3 588 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 DNAAF1Q8NEP3 725 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 OR51A4Q8NGJ6 313 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 OR4C13Q8NGP0 309 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 OR13C9Q8NGT0 318 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 PPP1R35Q8TAP8 253 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 LGALS12Q96DT0 336 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 PELI1Q96FA3 418 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 SNX22Q96L94 193 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 SPACA5Q96QH8 159 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 MEGF9Q9H1U4 602 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 MMP27Q9H306 513 aa14.35□□□□□ -0.11
NME3-205ENST00000563854 NEK6Q9HC98 313 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms