RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 DIRC2Q96SL1 478 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 SPOCK3Q9BQ16 436 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 NUDT16L1Q9BRJ7 211 aaKnown RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 CCDC32Q9BV29 185 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 C1orf123Q9NWV4 160 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 ZNF581Q9P0T4 197 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 RABL2AQ9UBK7 228 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 ELF5Q9UKW6 265 aaPredicted RBP8.59□□□□□ -1.03
SMG1-208ENST00000563448 RABL2BQ9UNT1 228 aa8.59□□□□□ -1.03
SMG1-208ENST00000563448 MEIOCA2RUB1 952 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 J3QKU1 62 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 HS3ST1O14792 307 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 GEMIN2O14893 280 aaKnown RBP8.58□□□□□ -1.04
SMG1-208ENST00000563448 UPK1BO75841 260 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 TPPPO94811 219 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 PRKACAP17612 351 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 TNFSF4P23510 183 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 CPT2P23786 658 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 GABRR1P24046 479 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 SNU13P55769 128 aaKnown RBP8.58□□□□□ -1.04
SMG1-208ENST00000563448 DGCR2P98153 550 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 PDCD1Q15116 288 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 FAM189A2Q15884 450 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 RNASE12Q5GAN4 147 aaKnown RBP8.58□□□□□ -1.04
SMG1-208ENST00000563448 SIGIRRQ6IA17 410 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 C16orf87Q6PH81 154 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 MOGAT3Q86VF5 341 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 OR8H2Q8N162 312 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 FAM58AQ8N1B3 248 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 Q8N402 240 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 CHST4Q8NCG5 386 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 EMG1Q92979 244 aaKnown RBP8.58□□□□□ -1.04
SMG1-208ENST00000563448 NRIP2Q9BQI9 281 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 AUNIPQ9H7T9 357 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 ZMAT3Q9HA38 289 aaKnown RBP8.58□□□□□ -1.04
SMG1-208ENST00000563448 RHOFQ9HBH0 211 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 HES4Q9HCC6 221 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 DYNLRB1Q9NP97 96 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 ABCB10Q9NRK6 738 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 FAM221AA4D161 298 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 WNT9BO14905 357 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 LANCL1O43813 399 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 SCGNO76038 276 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 CD8AP01732 235 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 DANCRP0C864 163 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 IL7P13232 177 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 GNB3P16520 340 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 BLVRBP30043 206 aaPredicted RBP8.58□□□□□ -1.04
SMG1-208ENST00000563448 CCL8P80075 99 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 CDNFQ49AH0 187 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 NHLRC3Q5JS37 347 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 OLFML2AQ68BL7 652 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 C11orf71Q6IPW1 123 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 OR10Z1Q8NGY1 313 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 LRRC29Q8WV35 223 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 ARHGAP5-AS1Q96IT6 56 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 PECRQ9BY49 303 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 MS4A5Q9H3V2 200 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 FN3KRPQ9HA64 309 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 GCM1Q9NP62 436 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 KCNK7Q9Y2U2 307 aa8.58□□□□□ -1.04
SMG1-208ENST00000563448 MYO18BQ8IUG5 2567 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 DSCAML1Q8TD84 2053 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 hCG_1807616A0A1W2PRN6 198 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 A1L4Q6 167 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 GSTZ1O43708 216 aaPredicted RBP8.57□□□□□ -1.04
SMG1-208ENST00000563448 GOSR1O95249 250 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 SOD3P08294 240 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 EGR1P18146 543 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 GMFBP60983 142 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 SNRPD2P62316 118 aaKnown RBP8.57□□□□□ -1.04
SMG1-208ENST00000563448 GUCA2AQ02747 115 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 TESK1Q15569 626 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 ZNF181Q2M3W8 571 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 FAM209AQ5JX71 171 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 DNM1P46Q6ZS02 220 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 Q6ZTK2 550 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 LYSMD2Q8IV50 215 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 Q8IYB0 196 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 GCSAMQ8N6F7 178 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 C15orf40Q8WUR7 153 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 SMIM4Q8WVI0 70 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 YIPF5Q969M3 257 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 RAB3CQ96E17 227 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 THAP7Q9BT49 309 aaPredicted RBP8.57□□□□□ -1.04
SMG1-208ENST00000563448 WDR13Q9H1Z4 485 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 PALMDQ9NP74 551 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 CBLN4Q9NTU7 201 aa8.57□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A10PA6NDY2 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A18PA6NE21 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A16PA6NEW6 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 TMEM235A6NFC5 223 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A20PA6NIJ5 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A8PA6NJQ4 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A7PA6NKC0 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A22PA8MWA6 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A12PA8MX19 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A5PA8MXJ8 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 FAM90A23PA8MXZ1 464 aa8.56□□□□□ -1.04
SMG1-208ENST00000563448 SRRM5B3KS81 715 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms