RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 MED30Q96HR3 178 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 CEP19Q96LK0 163 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 ZNF184Q99676 751 aaPredicted RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 MND1Q9BWT6 205 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 RBFOX1Q9NWB1 397 aaKnown RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 TAS2R4Q9NYW5 299 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 IL36RNQ9UBH0 155 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 RPUSD1Q9UJJ7 312 aaKnown RBP7.06□□□□□ -1.28
UBR1-204ENST00000563239 ERGIC3Q9Y282 383 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 TPRKBQ9Y3C4 175 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 AUP1Q9Y679 476 aa7.06□□□□□ -1.28
UBR1-204ENST00000563239 TRAV8-7A0A075B6U6 113 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 MAGEA13PA6NCF6 341 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 RGS10O43665 173 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 NDUFB3O43676 98 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 ENSAO43768 121 aaKnown RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 ANGPTL7O43827 346 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 ZNF737O75373 536 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 GPX5O75715 221 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 KDM4BO94953 1096 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 ECDO95905 644 aaPredicted RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 KNG1P01042 644 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 OCM2P0CE71 109 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 PPIAL4GP0DN37 164 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 CALCBP10092 127 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 CELP19835 753 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 SRP14P37108 136 aaKnown RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 GABRA2P47869 451 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 POU3F4P49335 361 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 GP2P55259 537 aaKnown RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 CAV3P56539 151 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 TAS2R43P59537 309 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 FGF12P61328 243 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 INSL4Q14641 139 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 SPHARQ15513 63 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 KISS1Q15726 138 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 SMIM21Q3B7S5 101 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 Q499Y3 187 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 RBM48Q5RL73 367 aaKnown RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 CD276Q5ZPR3 534 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 BTNL3Q6UXE8 466 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 UNQ9370/PRO34162Q6UXP9 181 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 PRSS48Q7RTY5 328 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 OR52N4Q8NGI2 321 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 OR5D18Q8NGL1 313 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 C8orf46Q8TAG6 207 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 UPRTQ96BW1 309 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 DERL3Q96Q80 235 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 TBX15Q96SF7 602 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 NKX3-1Q99801 234 aaPredicted RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 DCTN5Q9BTE1 182 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 SIRPDQ9H106 197 aa7.05□□□□□ -1.28
UBR1-204ENST00000563239 SEBOXQ9HB31 216 aaPredicted RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 ELL3Q9HB65 397 aaPredicted RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 SLC25A10Q9UBX3 287 aaPredicted RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 SOX21Q9Y651 276 aaPredicted RBP7.05□□□□□ -1.28
UBR1-204ENST00000563239 COL6A5A8TX70 2615 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 DOCK11Q5JSL3 2073 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 A0A1W2PPK0 400 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 TMEM82A0PJX8 343 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 NKX6-3A6NJ46 265 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 ZNF879B4DU55 563 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 GABRPO00591 440 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 ALDOBP05062 364 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 LIPFP07098 398 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 SFTPBP07988 381 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 HCKP08631 526 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 IGHV4-38-2P0DP08 117 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 RAB3AP20336 220 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 EPHA1P21709 976 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 MAP2K4P45985 399 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 SRSF2Q01130 221 aaKnown RBP7.04□□□□□ -1.28
UBR1-204ENST00000563239 TPBGQ13641 420 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 LRRC10Q5BKY1 277 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 ASCL4Q6XD76 172 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 LYPD6Q86Y78 171 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 MKXQ8IYA7 352 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 SAXO1Q8IYX7 474 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 BCL6BQ8N143 479 aaPredicted RBP7.04□□□□□ -1.28
UBR1-204ENST00000563239 FAM58AQ8N1B3 248 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 ZNF561Q8N587 486 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 Q8N7P7 452 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 ZSCAN4Q8NAM6 433 aaPredicted RBP7.04□□□□□ -1.28
UBR1-204ENST00000563239 NANPQ8TBE9 248 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 WDFY2Q96P53 400 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 OR14A2Q96R54 314 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 MRI1Q9BV20 369 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 CNTD2Q9H8S5 307 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 HMG20AQ9NP66 347 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 ZNF69Q9UC07 566 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 OR14J1Q9UGF5 321 aa7.04□□□□□ -1.28
UBR1-204ENST00000563239 IGHV3OR16-10A0A075B7F0 116 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 K7N7A8 449 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 SC5DO75845 299 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 TK1P04183 234 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 CD2P06729 351 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 NDUFB7P17568 137 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 FSTP19883 344 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 DUSP1P28562 367 aa7.03□□□□□ -1.28
UBR1-204ENST00000563239 TGFBR2P37173 567 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms