RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 GLS2Q9UI32 602 aa15.74■□□□□ 0.11
RAB40C-207ENST00000563109 SHISA3A0PJX4 238 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 SLC17A2O00624 439 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 ADAM20O43506 726 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 NOL3O60936 208 aaKnown RBP15.73■□□□□ 0.11
RAB40C-207ENST00000563109 HTR3BO95264 441 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 IGHV2-5P01817 119 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 SFTPBP07988 381 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 SERPINA2P20848 420 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 GABRA2P47869 451 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 SLC22A6Q4U2R8 563 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 SPIN3Q5JUX0 258 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 C1orf100Q5SVJ3 147 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 ASCL4Q6XD76 172 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 SLC36A1Q7Z2H8 476 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 C1QL2Q7Z5L3 287 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 LYPD6Q86Y78 171 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 OR5T2Q8NGG2 359 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 OR10K1Q8NGX5 313 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 NEIL1Q96FI4 390 aaPredicted RBP15.73■□□□□ 0.11
RAB40C-207ENST00000563109 GFI1Q99684 422 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 RNF167Q9H6Y7 350 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 PATZ1Q9HBE1 687 aaKnown RBP15.73■□□□□ 0.11
RAB40C-207ENST00000563109 HMG20AQ9NP66 347 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 OR14J1Q9UGF5 321 aa15.73■□□□□ 0.11
RAB40C-207ENST00000563109 F8VVB4 439 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 F8VWA3 439 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 SMAD7O15105 426 aaKnown RBP15.72■□□□□ 0.11
RAB40C-207ENST00000563109 SLC22A1O15245 554 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 TMPRSS2O15393 492 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 GABARAPO95166 117 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 PSG2P11465 335 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 SDC2P34741 201 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 SNU13P55769 128 aaKnown RBP15.72■□□□□ 0.11
RAB40C-207ENST00000563109 OR10A3P58181 314 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 FGF12P61328 243 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 DGUOKQ16854 277 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 ELP2Q6IA86 826 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 CLVS1Q8IUQ0 354 aaPredicted RBP15.72■□□□□ 0.11
RAB40C-207ENST00000563109 MAPK1IP1LQ8NDC0 245 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 ANGPTL6Q8NI99 470 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 CST11Q9H112 138 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 MYO9AB2RTY4 2548 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 AKAP9Q99996 3911 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 CR1P17927 2039 aa15.72■□□□□ 0.11
RAB40C-207ENST00000563109 RFPL4AA6NLU0 287 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 NOTOA8MTQ0 251 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 F5H0A9 414 aaPredicted RBP15.71■□□□□ 0.11
RAB40C-207ENST00000563109 RFPL4AL1F8VTS6 287 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 BPNT1O95861 308 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 CALCBP10092 127 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 GTF2F2P13984 249 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 LMO4P61968 165 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 MXD1Q05195 221 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 ESCO2Q56NI9 601 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 HES5Q5TA89 166 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 SLC16A12Q6ZSM3 486 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 OSR2Q8N2R0 312 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 MED30Q96HR3 178 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 COX4I2Q96KJ9 171 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 CCL13Q99616 98 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 STEAP1Q9UHE8 339 aa15.71■□□□□ 0.11
RAB40C-207ENST00000563109 IGKV1D-17A0A075B6S4 117 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 SMIM30A4D0T7 59 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 IFITM5A6NNB3 132 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 CRTAPO75718 401 aaPredicted RBP15.7■□□□□ 0.1
RAB40C-207ENST00000563109 HAND1O96004 215 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 CD37P11049 281 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 PRDX2P32119 198 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 SERPINB10P48595 397 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 PITPNBP48739 271 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 CAPZA1P52907 286 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 NCS1P62166 190 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 IL13RA1P78552 427 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 P2RY14Q15391 338 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 ATPAF1Q5TC12 328 aaPredicted RBP15.7■□□□□ 0.1
RAB40C-207ENST00000563109 LYPD2Q6UXB3 125 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 CIARTQ8N365 385 aaPredicted RBP15.7■□□□□ 0.1
RAB40C-207ENST00000563109 NAA50Q9GZZ1 169 aaKnown RBP15.7■□□□□ 0.1
RAB40C-207ENST00000563109 IL36RNQ9UBH0 155 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 KAAG1Q9UBP8 84 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 ZNF222Q9UK12 451 aa15.7■□□□□ 0.1
RAB40C-207ENST00000563109 AIPO00170 330 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 SH2D1BO14796 132 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 SIGLEC5O15389 551 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 NDUFB3O43676 98 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 WNT2P09544 360 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 ARSBP15848 533 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 IL2RGP31785 369 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 CEBPDP49716 269 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-207ENST00000563109 GZMKP49863 264 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 NPY4RP50391 375 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 VBP1P61758 197 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 GNB2P62879 340 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 IKZF1Q13422 519 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 IL13RA2Q14627 380 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 ZNF146Q15072 292 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 TMEM249Q2WGJ8 235 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 LRRC10Q5BKY1 277 aa15.69■□□□□ 0.1
RAB40C-207ENST00000563109 FAM166AQ6J272 317 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms