RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	ZNF573	Q86YE8	665 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	ERI1	Q8IV48	349 aa	Known RBP	6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	SBSPON	Q8IVN8	264 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	ZNF695	Q8IW36	515 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	LINC00471	Q8N535	108 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	COMMD1	Q8N668	190 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	RNF148	Q8N7C7	305 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	RNF152	Q8N8N0	203 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	OR6N2	Q8NGY6	317 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	NDNF	Q8TB73	568 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	PYURF	Q96I23	114 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	RCHY1	Q96PM5	261 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	CITED4	Q96RK1	184 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	CMC2	Q9NRP2	79 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	SLC22A13	Q9Y226	551 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	POLDIP2	Q9Y2S7	368 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	KLHDC2	Q9Y2U9	406 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	LYVE1	Q9Y5Y7	322 aa		6.55	□□□□□ -1.36
CKLF-208	ENST00000563092	KRTAP4-8	A0A0G2JLE6	195 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	hADV38S2	A0JD32	116 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	TMEM82	A0PJX8	343 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	MEX3A	A1L020	520 aa	Known RBP	6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	CCL24	O00175	119 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	GAST	P01350	101 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	LYN	P07948	512 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	SNRNP70	P08621	437 aa	Known RBP	6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	COX4I1	P13073	169 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	HAAO	P46952	286 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	RIPPLY1	Q0D2K3	151 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	IL24	Q13007	206 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	C9orf66	Q5T8R8	295 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	RTN4RL2	Q86UN3	420 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	THNSL2	Q86YJ6	484 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	ZNF676	Q8N7Q3	588 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	OR2T33	Q8NG76	320 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	OR9Q2	Q8NGE9	314 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	BCAS4	Q8TDM0	211 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	CHPT1	Q8WUD6	406 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	TSSK6	Q9BXA6	273 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	PKIB	Q9C010	78 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	MYLK2	Q9H1R3	596 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	FRRS1L	Q9P0K9	344 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092	HYDIN	Q4G0P3	5121 aa		6.54	□□□□□ -1.36
CKLF-208	ENST00000563092		A0A087X0M5	115 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092		A0A1B0GX30	115 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	FAM183A	A6NL82	134 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	LEUTX	A8MZ59	168 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	OOSP1	A8MZH6	123 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	HMGB1P1	B2RPK0	211 aa	Predicted RBP	6.53	□□□□□ -1.36
CKLF-208	ENST00000563092		F8VVB4	439 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092		F8VWA3	439 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	DLGAP1	O14490	977 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	KRT36	O76013	467 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	NRAS	P01111	189 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	IFNG	P01579	166 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	IGHG2	P01859	326 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ZNF3	P17036	446 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ALOX5AP	P20292	161 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ERP29	P30040	261 aa	Known RBP	6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	EDDM3B	P56851	147 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	FHL3	Q13643	280 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	KIR2DS1	Q14954	304 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ZNF684	Q5T5D7	378 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	PLCXD3	Q63HM9	321 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	DEGS2	Q6QHC5	323 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	BAIAP2L2	Q6UXY1	529 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	MOB3C	Q70IA8	216 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	GDPD3	Q7L5L3	318 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ABHD12	Q8N2K0	398 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	C5orf56	Q8N8D9	126 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	KLHL30-AS1	Q8NEE0	82 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	FAM81A	Q8TBF8	368 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	CAPSL	Q8WWF8	208 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	SNX22	Q96L94	193 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	NOL4L	Q96MY1	436 aa	Predicted RBP	6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	DUX3	Q96PT4	197 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	TEAD3	Q99594	435 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	DGCR6L	Q9BY27	220 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	MED20	Q9H944	212 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	EFCAB1	Q9HAE3	211 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	EDA2R	Q9HAV5	297 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	OR14J1	Q9UGF5	321 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ENPP5	Q9UJA9	477 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	ZNF256	Q9Y2P7	627 aa	Predicted RBP	6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	MOB4	Q9Y3A3	225 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	SMAD5-AS1	Q9Y6J3	95 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	HSPE1-MOB4	S4R3N1	261 aa		6.53	□□□□□ -1.36
CKLF-208	ENST00000563092	DHRS7C	A6NNS2	312 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	RIIAD1	A6NNX1	92 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	BUB1B-PAK6	H3BSN5	160 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	FGF16	O43320	207 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	PSPN	O60542	156 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	SELENOF	O60613	162 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	E2F6	O75461	281 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	SRSF10	O75494	262 aa	Known RBP	6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	DHRS3	O75911	302 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	FABP3	P05413	133 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	ECI1	P42126	302 aa		6.52	□□□□□ -1.37
CKLF-208	ENST00000563092	MAGEA2	P43356	314 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms