RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 DECR2Q9NUI1 292 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 PLEK2Q9NYT0 353 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 RCL1Q9Y2P8 373 aaKnown RBP12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 CNTRLQ7Z7A1 2325 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 NCOA6Q14686 2063 aaPredicted RBP12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 MSTNO14793 375 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 CEBPGP53567 150 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 CLINT1Q14677 625 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 ACER2Q5QJU3 275 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 LIAT1Q6ZQX7 453 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 CARFQ8N187 725 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 SUCNR1Q9BXA5 334 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 SLC2A9Q9NRM0 540 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 TRBV23-1A0A0A0MS06 115 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 GPR37O15354 613 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 NR2C1P13056 603 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 RAB1AP62820 205 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 IL13RA2Q14627 380 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 GNMTQ14749 295 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 PRAMEF20Q5VT98 475 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 SLC22A25Q6T423 547 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 MEX3BQ6ZN04 569 aaKnown RBP12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 HIST2H3AQ71DI3 136 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 LGI3Q8N145 548 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 AKR7LQ8NHP1 331 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 GALNT14Q96FL9 552 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 RARRES2Q99969 163 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 TGIF2Q9GZN2 237 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 MYOTQ9UBF9 498 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 ZDHHC8Q9ULC8 765 aa12.18□□□□□ -0.46
VPS9D1-202ENST00000561976 H7C1Q1 480 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 PHF1O43189 567 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 RPS10P46783 165 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 ENDOGQ14249 297 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 NKAIN1Q4KMZ8 207 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 PHYHD1Q5SRE7 291 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 LFNGQ8NES3 379 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 OR11L1Q8NGX0 322 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 SLAMF9Q96A28 289 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 MARS2Q96GW9 593 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 WDR77Q9BQA1 342 aaPredicted RBP12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 SYT3Q9BQG1 590 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 TMPRSS5Q9H3S3 457 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 HDGFL3Q9Y3E1 203 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 EXPH5Q8NEV8 1989 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 TRIOO75962 3097 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 IGHV3-15A0A0B4J1V0 119 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 ZFAND5O76080 213 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 PRSS12P56730 875 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 ZNF239Q16600 458 aaKnown RBP12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 SNAI3Q3KNW1 292 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 RHBDD2Q6NTF9 364 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 OR2AE1Q8NHA4 323 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 HPSE2Q8WWQ2 592 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 MALSU1Q96EH3 234 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 SPAG17Q6Q759 2223 aa12.17□□□□□ -0.46
VPS9D1-202ENST00000561976 BRWD1Q9NSI6 2320 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 PIAS2O75928 621 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 RD3LP0DJH9 198 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 AFF3P51826 1226 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 RAB2AP61019 212 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 RPS23P62266 143 aaKnown RBP12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 KIAA0141Q14154 515 aaPredicted RBP12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 RSPO1Q2MKA7 263 aaPredicted RBP12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 SYT13Q7L8C5 426 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 SPTSSAQ969W0 71 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 C18orf12Q96KH6 178 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 CHRDQ9H2X0 955 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 CCDC187A0A096LP49 1063 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 STARD6P59095 220 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 CDCP2Q5VXM1 449 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 WDSUB1Q8N9V3 476 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 OR2G3Q8NGZ4 309 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 RNF138Q8WVD3 245 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 SGK3Q96BR1 496 aa12.16□□□□□ -0.46
VPS9D1-202ENST00000561976 EYSQ5T1H1 3165 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 IGLV3-32A0A0A0MS00 114 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 C2CD4DB7Z1M9 353 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 NPIPA2E9PIF3 369 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 NPIPA3F8WFD2 350 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 YKT6O15498 198 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 DTYMKP23919 212 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 NXPH1P58417 271 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 EWSR1Q01844 656 aaKnown RBP eCLIP12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 ZFP62Q8NB50 900 aaPredicted RBP12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 EDARADDQ8WWZ3 215 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 MSI2Q96DH6 328 aaKnown RBP12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 BCL2L14Q9BZR8 327 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 ZNF700Q9H0M5 742 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 TINAGQ9UJW2 476 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 MMP24Q9Y5R2 645 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 RFNGQ9Y644 331 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 FAM24AA6NFZ4 105 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 CCDC85CA6NKD9 419 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 YIF1AO95070 293 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 IGHV2-70P01814 119 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 GLB1P16278 677 aa12.15□□□□□ -0.46
VPS9D1-202ENST00000561976 OMGP23515 440 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms