RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 METTL11BQ5VVY1 283 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 DMKNQ6E0U4 476 aaPredicted RBP16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 MKXQ8IYA7 352 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 EMG1Q92979 244 aaKnown RBP16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 SDSLQ96GA7 329 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 CNBD2Q96M20 576 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 DCTN5Q9BTE1 182 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 NEK6Q9HC98 313 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 RBFOX1Q9NWB1 397 aaKnown RBP16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 PAK1IP1Q9NWT1 392 aaPredicted RBP16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 TAS2R4Q9NYW5 299 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 ZNF281Q9Y2X9 895 aa16.46■□□□□ 0.23
TSPAN3-210ENST00000561277 ANGPTL7O43827 346 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 TOX4O94842 621 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 KNG1P01042 644 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 CALCBP10092 127 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 BCL3P20749 454 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 NPBWR2P48146 333 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 CAV3P56539 151 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 TAS2R43P59537 309 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 DOC2BQ14184 412 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 MYDGFQ969H8 173 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 TMEM106AQ96A25 262 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 WDFY2Q96P53 400 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 CNTD2Q9H8S5 307 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 ZNF69Q9UC07 566 aa16.45■□□□□ 0.22
TSPAN3-210ENST00000561277 RAB3AP20336 220 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 FPR2P25090 351 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 VHLP40337 213 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 PDZK1IP1Q13113 114 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 ZNF561Q8N587 486 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 NANOGP1Q8N7R0 232 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 LY6G5BQ8NDX9 201 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 OR51A2Q8NGJ7 313 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 ZNF418Q8TF45 676 aaPredicted RBP16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 PGLYRP3Q96LB9 341 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 TPRKBQ9Y3C4 175 aa16.44■□□□□ 0.22
TSPAN3-210ENST00000561277 A0A1W2PQ09 198 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 RNF212BA8MTL3 300 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 MMP9P14780 707 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 SNU13P55769 128 aaKnown RBP16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 ASPHD2Q6ICH7 369 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 Q8IYB0 196 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 BCL6BQ8N143 479 aaPredicted RBP16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 ORAI1Q96D31 301 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 TBX15Q96SF7 602 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 MND1Q9BWT6 205 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 MS4A7Q9GZW8 240 aaPredicted RBP16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 IL36RNQ9UBH0 155 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 PRKACAP17612 351 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 CELP19835 753 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 SLC35A2P78381 396 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 COL10A1Q03692 680 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 KISS1Q15726 138 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 YIF1BQ5BJH7 314 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 GPR157Q5UAW9 335 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 ASCC1Q8N9N2 400 aaKnown RBP16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 SUCNR1Q9BXA5 334 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 SIRPDQ9H106 197 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 PCDHGB5Q9Y5G0 923 aa16.43■□□□□ 0.22
TSPAN3-210ENST00000561277 IGKV1-12A0A0C4DH73 117 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 MAGEB3O15480 346 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 ALX3O95076 343 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 VENTXO95231 258 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 IGKV1D-12P01611 117 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 TMEM225BP0DP42 221 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 DUSP1P28562 367 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 PPP3R1P63098 170 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 KRTAP24-1Q3LI83 254 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 CRIP3Q6Q6R5 217 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 FIP1L1Q6UN15 594 aaKnown RBP16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 BRD3OSQ6XYD6 125 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 SATL1Q86VE3 508 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 FAM185AQ8N0U4 392 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 FAM58AQ8N1B3 248 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 C8orf46Q8TAG6 207 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 TMEM158Q8WZ71 300 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 NKX3-1Q99801 234 aaPredicted RBP16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 CDCA4Q9BXL8 241 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 RRP15Q9Y3B9 282 aaKnown RBP16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 KPTNQ9Y664 436 aa16.42■□□□□ 0.22
TSPAN3-210ENST00000561277 TRBV5-5A0A0J9YX44 114 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 TK1P04183 234 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 RPS11P62280 158 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 Q499Y3 187 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 RUSC1-AS1Q66K80 236 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 ZNF529Q6P280 563 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 PDZD9Q8IXQ8 264 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 LHX4Q969G2 390 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 OR14A2Q96R54 314 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 OR5M11Q96RB7 305 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 GPER1Q99527 375 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 RAB26Q9ULW5 256 aa16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 SOX21Q9Y651 276 aaPredicted RBP16.41■□□□□ 0.22
TSPAN3-210ENST00000561277 HAND1O96004 215 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 ZP1P60852 638 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 PRB3Q04118 309 aaPredicted RBP16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 MED22Q15528 200 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 RNLSQ5VYX0 342 aa16.4■□□□□ 0.22
TSPAN3-210ENST00000561277 VMO1Q7Z5L0 202 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms