RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SPSB1Q96BD6 273 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 UPRTQ96BW1 309 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 CEP19Q96LK0 163 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 SLC6A7Q99884 636 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 DCTN5Q9BTE1 182 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 MRI1Q9BV20 369 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 CDCA4Q9BXL8 241 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 CHCHD3Q9NX63 227 aaKnown RBP11.46□□□□□ -0.57
TPM1-230ENST00000561266 SLC25A10Q9UBX3 287 aaPredicted RBP11.46□□□□□ -0.57
TPM1-230ENST00000561266 OR14J1Q9UGF5 321 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 POLDIP2Q9Y2S7 368 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 ZNF281Q9Y2X9 895 aa11.46□□□□□ -0.57
TPM1-230ENST00000561266 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 A0A1W2PPK0 400 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 ZNF879B4DU55 563 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 SULT1B1O43704 296 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 ALX3O95076 343 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 IGFBP3P17936 291 aaPredicted RBP11.45□□□□□ -0.58
TPM1-230ENST00000561266 GP2P55259 537 aaKnown RBP11.45□□□□□ -0.58
TPM1-230ENST00000561266 SMIM21Q3B7S5 101 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 KRTAP24-1Q3LI83 254 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 RNLSQ5VYX0 342 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 CD276Q5ZPR3 534 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 BTNL3Q6UXE8 466 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 LHFPL2Q6ZUX7 228 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 TMEM185AQ8NFB2 350 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 OR52N4Q8NGI2 321 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 OR5D14Q8NGL3 314 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 C8orf46Q8TAG6 207 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 HAVCR2Q8TDQ0 301 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 GPR148Q8TDV2 347 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 H1FXQ92522 213 aaKnown RBP11.45□□□□□ -0.58
TPM1-230ENST00000561266 TMEM106AQ96A25 262 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 MED30Q96HR3 178 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
TPM1-230ENST00000561266 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 VCX3BQ9H321 246 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 KIAA2026Q5HYC2 2103 aa11.45□□□□□ -0.58
TPM1-230ENST00000561266 TRBV5-7A0A0A0MS05 114 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 TRAV40A0A0B4J280 105 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 TMEM82A0PJX8 343 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 MYL12BO14950 172 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 ZNF737O75373 536 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 KNG1P01042 644 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 IFNA2P01563 188 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 OCM2P0CE71 109 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 PPIAL4GP0DN37 164 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 NDUFB7P17568 137 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 CELP19835 753 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 MAP2K4P45985 399 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 SNU13P55769 128 aaKnown RBP11.44□□□□□ -0.58
TPM1-230ENST00000561266 CAV3P56539 151 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 ERVFRD-1P60508 538 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 COL10A1Q03692 680 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 MED21Q13503 144 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 KISS1Q15726 138 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 LRRC10Q5BKY1 277 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 RUSC1-AS1Q66K80 236 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 BRD3OSQ6XYD6 125 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 WDFY2Q96P53 400 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 OR14A2Q96R54 314 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 OCEL1Q9H607 264 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 CNTD2Q9H8S5 307 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 ESM1Q9NQ30 184 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 C19orf12Q9NSK7 152 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 SCN3BQ9NY72 215 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 NUP50Q9UKX7 468 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 RAB26Q9ULW5 256 aa11.44□□□□□ -0.58
TPM1-230ENST00000561266 MDFIC2A0A1B0GVS7 189 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 MEX3AA1L020 520 aaKnown RBP11.43□□□□□ -0.58
TPM1-230ENST00000561266 GABRPO00591 440 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 TOX4O94842 621 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 KDM4BO94953 1096 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 ECDO95905 644 aaPredicted RBP11.43□□□□□ -0.58
TPM1-230ENST00000561266 HCKP08631 526 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 HSPA13P48723 471 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 PDCD1Q15116 288 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 ARMCX4Q5H9R4 360 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 FAM27D1Q5T7N8 215 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 C17orf107Q6ZR85 190 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 PDZD9Q8IXQ8 264 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 MKXQ8IYA7 352 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 FAM58AQ8N1B3 248 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 OR4M1Q8NGD0 313 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
TPM1-230ENST00000561266 MYDGFQ969H8 173 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 ZNF581Q9P0T4 197 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 ERGIC3Q9Y282 383 aa11.43□□□□□ -0.58
TPM1-230ENST00000561266 CENPVL3A0A0U1RRI6 287 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 K7N7A8 449 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 PSPNO60542 156 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 TK1P04183 234 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 PRKACAP17612 351 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 RAB3AP20336 220 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 OR3A4PP47883 348 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 ACSM1Q08AH1 577 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 KLRD1Q13241 179 aa11.42□□□□□ -0.58
TPM1-230ENST00000561266 SPHARQ15513 63 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms