RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FHL5Q5TD97 284 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SYPL2Q5VXT5 272 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 NXNL2Q5VZ03 156 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 STEAP4Q687X5 459 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ZNF773Q6PK81 442 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 CRIP3Q6Q6R5 217 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ARL9Q6T311 187 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 C6orf120Q7Z4R8 191 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 NAA40Q86UY6 237 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SLC25A42Q86VD7 318 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 MYPOPQ86VE0 399 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 TMEM61Q8N0U2 210 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 NPWQ8N729 165 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 WDSUB1Q8N9V3 476 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR1M1Q8NGA1 313 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR4M2Q8NGB6 313 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR51D1Q8NGF3 324 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR10X1Q8NGY0 326 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR13C6PQ8NH95 151 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 LMO3Q8TAP4 145 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SSC4DQ8WTU2 575 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 TNFAIP8L1Q8WVP5 186 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ITLN1Q8WWA0 313 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 MAFIPQ8WZ33 124 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 PPCDCQ96CD2 204 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SEH1LQ96EE3 360 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 AURKBQ96GD4 344 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 SFRP2Q96HF1 295 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 C18orf12Q96KH6 178 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 PRAP1Q96NZ9 151 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 DUX3Q96PT4 197 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 GPER1Q99527 375 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 TSC22D3Q99576 134 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SDHCQ99643 169 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 HSD17B10Q99714 261 aaKnown RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 ARHGDIGQ99819 225 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SFXN3Q9BWM7 321 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 TBL1XR1Q9BZK7 514 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 EIF5A2Q9GZV4 153 aaKnown RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 TLNRD1Q9H1K6 362 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SPNS1Q9H2V7 528 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 OR51I2Q9H344 312 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 TXNIPQ9H3M7 391 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 UGT1A8Q9HAW9 530 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SLCO1B3Q9NPD5 702 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 XPNPEP1Q9NQW7 623 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 BIN3Q9NQY0 253 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 HEBP1Q9NRV9 189 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SPANXA1Q9NS26 97 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 DHRS4-AS1Q9P1J3 65 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 PAK5Q9P286 719 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ZNF391Q9UJN7 358 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 INSIG2Q9Y5U4 225 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ZNF780BQ9Y6R6 833 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 FRMPD3Q5JV73 1810 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 SNAPC4Q5SXM2 1469 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 ARHGEF17Q96PE2 2063 aaPredicted RBP1.6□□□□□ -2.15
RTF1-207ENST00000561076 NRCAMQ92823 1304 aa1.6□□□□□ -2.15
RTF1-207ENST00000561076 PEG3Q9GZU2 1588 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 EVPLQ92817 2033 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TOP2BQ02880 1626 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 GRIN2BQ13224 1484 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 MAGI1Q96QZ7 1491 aaPredicted RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 C5orf49A4QMS7 147 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 GMNCA6NCL1 334 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PGPA6NDG6 321 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CD300LBA8K4G0 201 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ZNF705GA8MUZ8 300 aaPredicted RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 TRIM49D1C9J1S8 452 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 D6RAR5 112 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 M0QYV0 167 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 LAD1O00515 517 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PEX7O00628 323 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SCO1O75880 301 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 ATG12O94817 140 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PPP1R3DO95685 299 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 IFNA1P01562 189 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CD5P06127 495 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 IGKV5-2P06315 115 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 FAM228BP0C875 321 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SNHG28P0DPA3 235 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TCN2P20062 427 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PSMB1P20618 241 aaKnown RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 HTR1EP28566 365 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 DDTP30046 118 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 TSPOP30536 169 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SERPINB1P30740 379 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 PRSS3P35030 304 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 BTCP35070 178 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 LGALS7P47929 136 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CSRP3P50461 194 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 H2BFSP57053 126 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 RIPPLY3P57055 190 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 SYNJ2BPP57105 145 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 RANP62826 216 aaKnown RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 SLC7A9P82251 487 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 RPL36AP83881 106 aaKnown RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 TFAMQ00059 246 aaKnown RBP1.59□□□□□ -2.15
RTF1-207ENST00000561076 FMODQ06828 376 aa1.59□□□□□ -2.15
RTF1-207ENST00000561076 CD300CQ08708 224 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms