RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 A0A1W2PRV1 198 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 OR2AT4A6NND4 320 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 FAM90A12PA8MX19 464 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HNRNPCL2B2RXH8 293 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HNRNPCL3B7ZW38 293 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 M0R2N4 97 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 CDIPTO14735 213 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 AZIN1O14977 448 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 RER1O15258 196 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 POLR3GO15318 223 aaPredicted RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 TPST1O60507 370 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HNRNPCL1O60812 293 aaKnown RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 PEX11AO75192 247 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ACTL6BO94805 426 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 GSTA1P08263 222 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 TSPAN19P0C672 248 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 OR8U9P0C7N5 309 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 CFC1BP0CG36 223 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 CFC1P0CG37 223 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HNRNPCL4P0DMR1 293 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 PSG2P11465 335 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 NEFHP12036 1026 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 CTLA4P16410 223 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 BRS3P32247 399 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 SERPINB5P36952 375 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 MDH1P40925 334 aaKnown RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 AQP2P41181 271 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 GPR12P47775 334 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 SLC9A3P48764 834 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 CLDN8P56748 225 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 BRWD1-AS2P59051 145 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HIST1H3AP68431 136 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ZNF92Q03936 586 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 RPL18Q07020 188 aaKnown RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 DYNC1I2Q13409 638 aaKnown RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 SNAPC1Q16533 368 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 LGALS9BQ3B8N2 356 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 KRT71Q3SY84 523 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 C6orf136Q5SQH8 315 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HIST2H3PS2Q5TEC6 136 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 LCN8Q6JVE9 175 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 LIN54Q6MZP7 749 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 SMARCD3Q6STE5 483 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 IL34Q6ZMJ4 242 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HIST2H3AQ71DI3 136 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 PGAP1Q75T13 922 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 DPY19L4Q7Z388 723 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 SLC35E3Q7Z769 313 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 LYG2Q86SG7 212 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 C10orf107Q8IVU9 208 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ZNF491Q8N8L2 437 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 OR4P4Q8NGL7 312 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 MOSPD2Q8NHP6 518 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 SDSLQ96GA7 329 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 UBE2E2Q96LR5 201 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 UHRF2Q96PU4 802 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 RBP7Q96R05 134 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 OR5B12Q96R08 314 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ALG12Q9BV10 488 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 C1orf50Q9BV19 199 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ALX4Q9H161 411 aaPredicted RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 SP140LQ9H930 580 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 BCL2L10Q9HD36 194 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 NDUFAF4Q9P032 175 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ACTR3BQ9P1U1 418 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 ZNF229Q9UJW7 825 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 IFT52Q9Y366 437 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 MOB4Q9Y3A3 225 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 NOP16Q9Y3C1 178 aaKnown RBP2.77□□□□□ -1.97
HERC1-211ENST00000560983 JRKLQ9Y4A0 524 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 HSPE1-MOB4S4R3N1 261 aa2.77□□□□□ -1.97
HERC1-211ENST00000560983 TNXBP22105 4242 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 DNAH8Q96JB1 4490 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 IGHV2-26A0A0B4J1V2 119 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 A0A1W2PPH5 198 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 A0A1W2PPM1 405 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 MEX3AA1L020 520 aaKnown RBP2.76□□□□□ -1.97
HERC1-211ENST00000560983 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 MSGN1A6NI15 193 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 LY6LH3BQJ8 138 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 BHLHE40O14503 412 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 GAGE7O76087 117 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 BCHEP06276 602 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 FGF4P08620 206 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 ACSM4P0C7M7 580 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 GAGE12FP0CL80 117 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 GAGE12GP0CL81 117 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 GAGE12IP0CL82 117 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 HTR1DP28221 377 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 GNALP38405 381 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 ANP32AP39687 249 aaKnown RBP2.76□□□□□ -1.97
HERC1-211ENST00000560983 NAA10P41227 235 aaPredicted RBP2.76□□□□□ -1.97
HERC1-211ENST00000560983 CDKN2CP42773 168 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 GUCA1AP43080 201 aaPredicted RBP2.76□□□□□ -1.97
HERC1-211ENST00000560983 GABRA2P47869 451 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 DAP3P51398 398 aaKnown RBP2.76□□□□□ -1.97
HERC1-211ENST00000560983 CRISP3P54108 245 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 TCTAP57738 103 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 ISL1P61371 349 aa2.76□□□□□ -1.97
HERC1-211ENST00000560983 ESRRGP62508 458 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms