RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 E7EQL1 145 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 XRCC3O43542 346 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 KDM4BO94953 1096 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 OR4A8P0C604 315 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 MGMTP16455 207 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 SERPINA2P20848 420 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 PITPNAQ00169 270 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 RSU1Q15404 277 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 CLLU1Q5K131 121 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 TMEM69Q5SWH9 247 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 WDR86Q86TI4 376 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 MKXQ8IYA7 352 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 SAXO1Q8IYX7 474 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 ABHD1Q96SE0 405 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 URM1Q9BTM9 101 aaKnown RBP9.55□□□□□ -0.88
USP3-218ENST00000560202 TMEM59Q9BXS4 323 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 LPAR5Q9H1C0 372 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 PLK3Q9H4B4 646 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 NKIRAS2Q9NYR9 191 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 IL36GQ9NZH8 169 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 RABL2AQ9UBK7 228 aaPredicted RBP9.55□□□□□ -0.88
USP3-218ENST00000560202 ALG5Q9Y673 324 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 HIVEP3Q5T1R4 2406 aa9.55□□□□□ -0.88
USP3-218ENST00000560202 KMT2BQ9UMN6 2715 aaPredicted RBP9.54□□□□□ -0.88
USP3-218ENST00000560202 A0A0A6YYH2 397 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 LRP5LA4QPB2 252 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 A6NJ64 397 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 F5H5P2 479 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 C19orf84I3L1E1 186 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 SYNGR1O43759 233 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 HTR3BO95264 441 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 CYB5AP00167 134 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 CSTBP04080 98 aaKnown RBP9.54□□□□□ -0.88
USP3-218ENST00000560202 MPZP25189 248 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 LOXP28300 417 aaPredicted RBP9.54□□□□□ -0.88
USP3-218ENST00000560202 MNDAP41218 407 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 PTH2RP49190 550 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 TAS2R20P59543 309 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 RPS27AP62979 156 aaKnown RBP9.54□□□□□ -0.88
USP3-218ENST00000560202 FAM189A2Q15884 450 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 NKPD1Q17RQ9 610 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 LAMTOR1Q6IAA8 161 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 TEX261Q6UWH6 196 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 TMEM200AQ86VY9 491 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 C9orf62Q8N4C0 152 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 OR2Z1Q8NG97 314 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 GTF3AQ92664 365 aaKnown RBP9.54□□□□□ -0.88
USP3-218ENST00000560202 NEUROG1Q92886 237 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 SLAMF9Q96A28 289 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 PIK3IP1Q96FE7 263 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 HS3ST6Q96QI5 342 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 PKIBQ9C010 78 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 PCDHB16Q9NRJ7 776 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 FBXO9Q9UK97 447 aaPredicted RBP9.54□□□□□ -0.88
USP3-218ENST00000560202 U3KQ87 197 aa9.54□□□□□ -0.88
USP3-218ENST00000560202 DIDO1Q9BTC0 2240 aaKnown RBP9.53□□□□□ -0.88
USP3-218ENST00000560202 TRAV18A0A075B6X5 111 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 A0A0B4J293 547 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 FAM240BA0A1B0GVZ2 78 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 WIPF3A6NGB9 483 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 TRIM77I1YAP6 450 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 PYCARD-AS1I3L0S3 204 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 J3QT63 122 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 RAB27BO00194 218 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 PLA2G10O15496 165 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 SCGNO76038 276 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 PLAUP00749 431 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 GRPP07492 148 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 SFTPBP07988 381 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 CHRM2P08172 466 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 GTF2F2P13984 249 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 SERPINF1P36955 418 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 VEGFCP49767 419 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 MZT1Q08AG7 82 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 IL24Q13007 206 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 ZNF154Q13106 437 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 GRK1Q15835 563 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 MOGAT2Q3SYC2 334 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 RAB12Q6IQ22 244 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 Q8N402 240 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 SCCPDHQ8NBX0 429 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 ACBD4Q8NC06 268 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 OR51T1Q8NGJ9 327 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 AQP3Q92482 292 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 NICN1Q9BSH3 213 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 TMEM204Q9BSN7 226 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 TM2D1Q9BX74 207 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 SELENOIQ9C0D9 397 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 MTCH1Q9NZJ7 389 aa9.53□□□□□ -0.88
USP3-218ENST00000560202 ZNF462Q96JM2 2506 aa9.52□□□□□ -0.88
USP3-218ENST00000560202 A0A0A6YYD4 124 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 IGHV3-64DA0A0J9YX35 117 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 TRAPPC2LH3BP13 241 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 CTDSPLO15194 276 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 LYRM1O43325 122 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 SPRY3O43610 288 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 IGFBP2P18065 325 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 BCL3P20749 454 aa9.52□□□□□ -0.89
USP3-218ENST00000560202 APOBEC3AP31941 199 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms