RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 SLC25A26Q70HW3 274 aa16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 CBR4Q8N4T8 237 aa16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 DNAAF1Q8NEP3 725 aa16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 C17orf50Q8WW18 174 aa16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 SLAMF9Q96A28 289 aa16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 ADAT3Q96EY9 351 aaPredicted RBP16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 FRRS1LQ9P0K9 344 aa16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 EXOGQ9Y2C4 368 aaKnown RBP16.66■□□□□ 0.26
CHRNA3-207ENST00000559941 SLC16A6O15403 523 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 ZNF737O75373 536 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 ISG15P05161 165 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 ATP1B3P54709 279 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 OR12D2P58182 307 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 ERVFRD-1P60508 538 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 EGFL6Q8IUX8 553 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 C10orf67Q8IYJ2 551 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 ACBD7Q8N6N7 88 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 ASCC1Q8N9N2 400 aaKnown RBP16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 MBOAT4Q96T53 435 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 SSX3Q99909 188 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 SEBOXQ9HB31 216 aaPredicted RBP16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 CMYA5Q8N3K9 4069 aa16.65■□□□□ 0.26
CHRNA3-207ENST00000559941 VWFP04275 2813 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 IGKV1-9A0A0C4DH69 117 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 SNTNA6NMZ2 147 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 C17orf98A8MV24 154 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 H3BUX3 64 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 INMTO95050 263 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 HTR1AP08908 422 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 RBP2P50120 134 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 CCR9P51686 369 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 DLX6P56179 175 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 NANOS3P60323 173 aaKnown RBP16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 AANATQ16613 207 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 UTS2BQ765I0 119 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 FGGYQ96C11 551 aa16.64■□□□□ 0.25
CHRNA3-207ENST00000559941 PIPP12273 146 aaPredicted RBP16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 GABRB1P18505 474 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 ATF1P18846 271 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 PRKACBP22694 351 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 Q8IYB0 196 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 EMG1Q92979 244 aaKnown RBP16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 LGALS12Q96DT0 336 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 PELI1Q96FA3 418 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 SNX22Q96L94 193 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 PPA2Q9H2U2 334 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 AASSQ9UDR5 926 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 GMPPBQ9Y5P6 360 aa16.63■□□□□ 0.25
CHRNA3-207ENST00000559941 TIMM23O14925 209 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 WIPF1O43516 503 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF20P17024 532 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 COX7A1P24310 79 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 AZGP1P25311 298 aaKnown RBP16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 BMXP51813 675 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 MTCP1P56278 107 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 ACTA2P62736 377 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 ACTG2P63267 376 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 LRRC75BQ2VPJ9 315 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF782Q6ZMW2 699 aaPredicted RBP16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 GDPD3Q7L5L3 318 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 ENTHD1Q8IYW4 607 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 OR8H2Q8N162 312 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 MRPL48Q96GC5 212 aaKnown RBP16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 C9orf16Q9BUW7 83 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 HHLA2Q9UM44 414 aa16.62■□□□□ 0.25
CHRNA3-207ENST00000559941 TMEM82A0PJX8 343 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 J3QLW9 94 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 M0QZ24 198 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 CYB5AP00167 134 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 RBP4P02753 201 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF728P0DKX0 622 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF19P17023 458 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 NPBWR2P48146 333 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 POU3F4P49335 361 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 LGALS4P56470 323 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 EDDM3BP56851 147 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF91Q05481 1191 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 MEF2CQ06413 473 aaPredicted RBP16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 ASPHD2Q6ICH7 369 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 SLC35E4Q6ICL7 350 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 LHFPL2Q6ZUX7 228 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 RHOXF1Q8NHV9 184 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 C4orf36Q96KX1 117 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 MYCBPQ99417 103 aaPredicted RBP16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 SLC29A1Q99808 456 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 IL36RNQ9UBH0 155 aa16.61■□□□□ 0.25
CHRNA3-207ENST00000559941 TRBV2A0A0J9YWF9 115 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 FAM90A8PA6NJQ4 464 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 OR4C45A6NMZ5 311 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 MPZL2O60487 215 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 HAND1O96004 215 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 DBTP11182 482 aaKnown RBP16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 BCL3P20749 454 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 PAX6P26367 422 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 ALKBH1Q13686 389 aaKnown RBP16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 GALEQ14376 348 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 ZNF146Q15072 292 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 LY6EQ16553 131 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 CRIP3Q6Q6R5 217 aa16.6■□□□□ 0.25
CHRNA3-207ENST00000559941 FAM58AQ8N1B3 248 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms